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INSTALL report for gage on tokay1

This page was generated on 2018-04-12 13:20:26 -0400 (Thu, 12 Apr 2018).

Package 513/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gage 2.28.2
Weijun Luo
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/gage
Branch: RELEASE_3_6
Last Commit: 8b4dd5c
Last Changed Date: 2018-02-10 14:18:51 -0400 (Sat, 10 Feb 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gage
Version: 2.28.2
Command: rm -rf gage.buildbin-libdir && mkdir gage.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/gage_2.28.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=gage.buildbin-libdir --merge-multiarch gage_2.28.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL gage_2.28.2.zip && rm gage_2.28.2.tar.gz gage_2.28.2.zip
StartedAt: 2018-04-11 18:33:38 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:34:33 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 54.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   rm -rf gage.buildbin-libdir && mkdir gage.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/gage_2.28.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=gage.buildbin-libdir --merge-multiarch gage_2.28.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL gage_2.28.2.zip  && rm gage_2.28.2.tar.gz gage_2.28.2.zip
###
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100 1644k  100 1644k    0     0  43.6M      0 --:--:-- --:--:-- --:--:-- 48.6M

install for i386

* installing *source* package 'gage' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'gage'
    finding HTML links ... done
    eg2sym                                  html  
    egSymb                                  html  
    essGene                                 html  
    esset.grp                               html  
    gage-internal                           html  
    gage                                    html  
    gageComp                                html  
    gagePipe                                html  
    geneData                                html  
    go.gsets                                html  
    gs.tTest                                html  
    gse16873                                html  
    heter.gage                              html  
    kegg.gs                                 html  
    kegg.gsets                              html  
    readExpData                             html  
    readList                                html  
    sigGeneSet                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'gage' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gage' as gage_2.28.2.zip
* DONE (gage)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'gage' successfully unpacked and MD5 sums checked
In R CMD INSTALL