Moritz Gerstung
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/deepSNV |
| Branch: RELEASE_3_6 |
| Last Commit: cfa5955 |
| Last Changed Date: 2017-10-30 12:39:38 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:21:33 -0400 (Thu, 12 Apr 2018).
| Package 343/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| deepSNV 1.24.0 Moritz Gerstung
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: deepSNV |
| Version: 1.24.0 |
| Command: cd deepSNV.buildbin-libdir/deepSNV && zip -r ../../deepSNV_1.24.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:34:03 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:34:41 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 38.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: deepSNV_1.24.0.zip |
| PackageFileSize: 5.574 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd deepSNV.buildbin-libdir/deepSNV && zip -r ../../deepSNV_1.24.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: CITATION (332 bytes security) (deflated 59%) adding: data/ (372 bytes security) (stored 0%) adding: data/counts.RData (332 bytes security) (stored 0%) adding: data/HIVmix.RData (332 bytes security) (deflated 8%) adding: data/phiX.RData (332 bytes security) (deflated 4%) adding: data/pi.RData (332 bytes security) (deflated 6%) adding: data/RCC.RData (332 bytes security) (deflated 5%) adding: data/trueSNVs.RData (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 46%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/deepSNV.pdf (332 bytes security) (deflated 17%) adding: doc/deepSNV.R (332 bytes security) (deflated 66%) adding: doc/deepSNV.Rnw (332 bytes security) (deflated 58%) adding: doc/index.html (332 bytes security) (deflated 70%) adding: doc/shearwater.pdf (332 bytes security) (deflated 28%) adding: doc/shearwater.R (332 bytes security) (deflated 64%) adding: doc/shearwater.Rnw (332 bytes security) (deflated 61%) adding: doc/shearwaterML.html (332 bytes security) (deflated 65%) adding: doc/shearwaterML.R (332 bytes security) (deflated 56%) adding: doc/shearwaterML.Rmd (332 bytes security) (deflated 47%) adding: example/ (372 bytes security) (stored 0%) adding: example/deepSNV-example.R (332 bytes security) (deflated 50%) adding: example/shearwater-example.R (332 bytes security) (deflated 42%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/control.bam (332 bytes security) (deflated 0%) adding: extdata/control.bam.bai (332 bytes security) (deflated 61%) adding: extdata/deepSNV.vcf (332 bytes security) (deflated 65%) adding: extdata/shearwater.vcf (332 bytes security) (deflated 61%) adding: extdata/shearwater2.vcf (332 bytes security) (deflated 67%) adding: extdata/shearwaterML.vcf (332 bytes security) (deflated 66%) adding: extdata/test.bam (332 bytes security) (deflated 0%) adding: extdata/test.bam.bai (332 bytes security) (deflated 62%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 74%) adding: help/deepSNV.rdb (332 bytes security) (deflated 2%) adding: help/deepSNV.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 78%) adding: html/bam2R.html (332 bytes security) (deflated 57%) adding: html/betabinLRT.html (332 bytes security) (deflated 57%) adding: html/bf2Vcf.html (332 bytes security) (deflated 60%) adding: html/consensusSequence-methods.html (332 bytes security) (deflated 58%) adding: html/control-methods.html (332 bytes security) (deflated 51%) adding: html/coordinates-methods.html (332 bytes security) (deflated 50%) adding: html/counts.html (332 bytes security) (deflated 41%) adding: html/dbetabinom.html (332 bytes security) (deflated 55%) adding: html/deepSNV-class.html (332 bytes security) (deflated 58%) adding: html/deepSNV-methods.html (332 bytes security) (deflated 65%) adding: html/deepSNV-package.html (332 bytes security) (deflated 53%) adding: html/estimateDirichlet-methods.html (332 bytes security) (deflated 55%) adding: html/estimateDispersion-methods.html (332 bytes security) (deflated 58%) adding: html/estimateRho.html (332 bytes security) (deflated 53%) adding: html/Extract-methods.html (332 bytes security) (deflated 53%) adding: html/loadAllData.html (332 bytes security) (deflated 53%) adding: html/makePrior.html (332 bytes security) (deflated 51%) adding: html/manhattanPlot.html (332 bytes security) (deflated 49%) adding: html/mcChunk.html (332 bytes security) (deflated 57%) adding: html/normalize-methods.html (332 bytes security) (deflated 58%) adding: html/p.combine.html (332 bytes security) (deflated 53%) adding: html/p.val-methods.html (332 bytes security) (deflated 48%) adding: html/pbetabinom.html (332 bytes security) (deflated 55%) adding: html/phiX.html (332 bytes security) (deflated 40%) adding: html/pi.html (332 bytes security) (deflated 39%) adding: html/plot.deepSNV.html (332 bytes security) (deflated 59%) adding: html/qvals2Vcf.html (332 bytes security) (deflated 60%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/RCC.html (332 bytes security) (deflated 42%) adding: html/repeatMask-methods.html (332 bytes security) (deflated 54%) adding: html/RF.html (332 bytes security) (deflated 49%) adding: html/shearwater.html (332 bytes security) (deflated 61%) adding: html/show-deepSNV-method.html (332 bytes security) (deflated 52%) adding: html/summary-methods.html (332 bytes security) (deflated 70%) adding: html/test-methods.html (332 bytes security) (deflated 50%) adding: html/trueSNVs.html (332 bytes security) (deflated 42%) adding: INDEX (332 bytes security) (deflated 65%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/deepSNV.dll (332 bytes security) (deflated 54%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/deepSNV.dll (332 bytes security) (deflated 66%) adding: MD5 (332 bytes security) (deflated 48%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 57%) adding: NEWS (332 bytes security) (deflated 57%) adding: R/ (372 bytes security) (stored 0%) adding: R/deepSNV (332 bytes security) (deflated 41%) adding: R/deepSNV.rdb (332 bytes security) (deflated 31%) adding: R/deepSNV.rdx (332 bytes security) (stored 0%) adding: TODO (332 bytes security) (deflated 5%)