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INSTALL report for customProDB on tokay1

This page was generated on 2018-04-12 13:22:55 -0400 (Thu, 12 Apr 2018).

Package 319/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
customProDB 1.18.0
xiaojing wang
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/customProDB
Branch: RELEASE_3_6
Last Commit: db10104
Last Changed Date: 2017-10-30 12:40:03 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: customProDB
Version: 1.18.0
Command: rm -rf customProDB.buildbin-libdir && mkdir customProDB.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/customProDB_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=customProDB.buildbin-libdir --merge-multiarch customProDB_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL customProDB_1.18.0.zip && rm customProDB_1.18.0.tar.gz customProDB_1.18.0.zip
StartedAt: 2018-04-11 18:53:11 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:54:43 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 92.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf customProDB.buildbin-libdir && mkdir customProDB.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/customProDB_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=customProDB.buildbin-libdir --merge-multiarch customProDB_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL customProDB_1.18.0.zip  && rm customProDB_1.18.0.tar.gz customProDB_1.18.0.zip
###
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100  437k  100  437k    0     0  8800k      0 --:--:-- --:--:-- --:--:-- 9515k

install for i386

* installing *source* package 'customProDB' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'customProDB'
    finding HTML links ... done
    Bed2Range                               html  
    InputVcf                                html  
    JunctionType                            html  
    Multiple_VCF                            html  
    OutputNovelJun                          html  
    OutputVarprocodingseq                   html  
    OutputVarproseq                         html  
    OutputVarproseq_single                  html  
    Outputaberrant                          html  
    Outputproseq                            html  
    OutputsharedPro                         html  
    Positionincoding                        html  
    PrepareAnnotationEnsembl                html  
    PrepareAnnotationRefseq                 html  
    SharedJunc                              html  
    Varlocation                             html  
    aaVariation                             html  
    calculateRPKM                           html  
    easyRun                                 html  
    easyRun_mul                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'customProDB' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'customProDB' as customProDB_1.18.0.zip
* DONE (customProDB)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'customProDB' successfully unpacked and MD5 sums checked
In R CMD INSTALL