Dorothee Childs
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/TPP |
| Branch: RELEASE_3_6 |
| Last Commit: ce607f8 |
| Last Changed Date: 2017-10-30 12:40:50 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:26:08 -0400 (Thu, 12 Apr 2018).
| Package 1410/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| TPP 3.6.0 Dorothee Childs
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: TPP |
| Version: 3.6.0 |
| Command: cd TPP.buildbin-libdir/TPP && zip -r ../../TPP_3.6.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 05:06:43 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 05:07:14 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 30.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: TPP_3.6.0.zip |
| PackageFileSize: 17.41 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd TPP.buildbin-libdir/TPP && zip -r ../../TPP_3.6.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/datalist (332 bytes security) (deflated 52%) adding: data/hdacCCR_smallExample.RData (332 bytes security) (deflated 0%) adding: data/hdacTR_resultsTable_smallExample.RData (332 bytes security) (deflated 0%) adding: data/hdacTR_smallExample.RData (332 bytes security) (deflated 0%) adding: data/panobinostat_2DTPP_smallExample.RData (332 bytes security) (deflated 0%) adding: data/TPPTR_reference_results_HepG2.RData (332 bytes security) (deflated 0%) adding: DESCRIPTION (332 bytes security) (deflated 39%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 74%) adding: doc/NPARC_analysis_of_TPP_TR_data.pdf (332 bytes security) (deflated 16%) adding: doc/NPARC_analysis_of_TPP_TR_data.R (332 bytes security) (deflated 63%) adding: doc/NPARC_analysis_of_TPP_TR_data.Rnw (332 bytes security) (deflated 53%) adding: doc/TPP_introduction_1D.pdf (332 bytes security) (deflated 17%) adding: doc/TPP_introduction_1D.R (332 bytes security) (deflated 75%) adding: doc/TPP_introduction_1D.Rnw (332 bytes security) (deflated 68%) adding: doc/TPP_introduction_2D.pdf (332 bytes security) (deflated 10%) adding: doc/TPP_introduction_2D.R (332 bytes security) (deflated 72%) adding: doc/TPP_introduction_2D.Rnw (332 bytes security) (deflated 63%) adding: example_data/ (372 bytes security) (stored 0%) adding: example_data/2D_example_data/ (372 bytes security) (stored 0%) adding: example_data/2D_example_data/fractAbundInData.RData (332 bytes security) (deflated 8%) adding: example_data/2D_example_data/Panobinostat_TPP-2D_config.xlsx (332 bytes security) (deflated 27%) adding: example_data/2D_example_data/PFC_39093_PF1_QV1_P0101918C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/PFC_39099_PF1_QV1_P0101908C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/PFC_39101_PF1_QV1_P0101898C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/PFC_39106_PF1_QV1_P0101868C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/PFC_39108_PF1_QV1_P0101878C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/PFC_39110_PF1_QV1_P0101888C.txt (332 bytes security) (deflated 52%) adding: example_data/2D_example_data/referenceNormData.RData (332 bytes security) (deflated 14%) adding: example_data/2D_example_data/shortCCRresults.RData (332 bytes security) (deflated 80%) adding: example_data/2D_example_data/shortData2d.RData (332 bytes security) (deflated 83%) adding: example_data/CCR_example_data/ (372 bytes security) (stored 0%) adding: example_data/CCR_example_data/panobinostat_1_merged_results_20150227_1017_proteins.txt (332 bytes security) (deflated 60%) adding: example_data/CCR_example_data/panobinostat_2_merged_results_20150227_1110_proteins.txt (332 bytes security) (deflated 59%) adding: example_data/CCR_example_data/Panobinostat_TPP-CCR_config.xlsx (332 bytes security) (deflated 28%) adding: example_data/TR_example_data/ (372 bytes security) (stored 0%) adding: example_data/TR_example_data/panobinostat_1_merged_results_20150226_1013_proteins.txt (332 bytes security) (deflated 57%) adding: example_data/TR_example_data/panobinostat_2_merged_results_20150226_1139_proteins.txt (332 bytes security) (deflated 57%) adding: example_data/TR_example_data/Panobinostat_TPP-TR_config.xlsx (332 bytes security) (deflated 29%) adding: example_data/TR_example_data/vehicle_1_merged_results_20150227_0908_proteins.txt (332 bytes security) (deflated 57%) adding: example_data/TR_example_data/vehicle_2_merged_results_20150227_0847_proteins.txt (332 bytes security) (deflated 57%) adding: extdata/ (372 bytes security) (stored 0%) adding: extdata/randomESet.Rdata (332 bytes security) (deflated 1%) adding: extdata/validationData_meltCurveFilter.Rdata (332 bytes security) (deflated 0%) adding: extdata/validationData_pvalBinning.Rdata (332 bytes security) (stored 0%) adding: extdata/validationData_pvalComputation.Rdata (332 bytes security) (deflated 0%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 72%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/TPP.rdb (332 bytes security) (deflated 1%) adding: help/TPP.rdx (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 80%) adding: html/analyze2DTPP.html (332 bytes security) (deflated 68%) adding: html/analyzeTPPCCR.html (332 bytes security) (deflated 63%) adding: html/analyzeTPPTR.html (332 bytes security) (deflated 66%) adding: html/hdacCCR_config.html (332 bytes security) (deflated 48%) adding: html/hdacCCR_data.html (332 bytes security) (deflated 46%) adding: html/hdacCCR_smallExample.html (332 bytes security) (deflated 44%) adding: html/hdacTR_config.html (332 bytes security) (deflated 47%) adding: html/hdacTR_data.html (332 bytes security) (deflated 45%) adding: html/hdacTR_resultsTable_smallExample.html (332 bytes security) (deflated 46%) adding: html/hdacTR_smallExample.html (332 bytes security) (deflated 44%) adding: html/panobinostat_2DTPP_config.html (332 bytes security) (deflated 55%) adding: html/panobinostat_2DTPP_data.html (332 bytes security) (deflated 47%) adding: html/panobinostat_2DTPP_smallExample.html (332 bytes security) (deflated 49%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/resultTable.html (332 bytes security) (deflated 46%) adding: html/TPP-deprecated.html (332 bytes security) (deflated 65%) adding: html/TPP.html (332 bytes security) (deflated 51%) adding: html/tpp2dAddAdditionalInfo.html (332 bytes security) (deflated 51%) adding: html/tpp2dCalcFractAbundance.html (332 bytes security) (deflated 57%) adding: html/tpp2dComputeFoldChanges.html (332 bytes security) (deflated 58%) adding: html/tpp2dCreateDRplots.html (332 bytes security) (deflated 59%) adding: html/tpp2dCreateReport.html (332 bytes security) (deflated 65%) adding: html/tpp2dCreateTPPTRreference.html (332 bytes security) (deflated 60%) adding: html/tpp2dCurveFit.html (332 bytes security) (deflated 61%) adding: html/tpp2dExport.html (332 bytes security) (deflated 62%) adding: html/tpp2dExportPlots.html (332 bytes security) (deflated 51%) adding: html/tpp2dImport.html (332 bytes security) (deflated 62%) adding: html/tpp2dMerge2dRef.html (332 bytes security) (deflated 62%) adding: html/tpp2dNormalize.html (332 bytes security) (deflated 55%) adding: html/tpp2dPlotQChist.html (332 bytes security) (deflated 58%) adding: html/tpp2dPlotQCpEC50.html (332 bytes security) (deflated 52%) adding: html/tpp2dSplineFitAndTest.html (332 bytes security) (deflated 62%) adding: html/tpp2dSplinePlot.html (332 bytes security) (deflated 60%) adding: html/tpp2dTRReferenceObject.html (332 bytes security) (deflated 56%) adding: html/tppccrCurveFit.html (332 bytes security) (deflated 64%) adding: html/tppccrImport.html (332 bytes security) (deflated 61%) adding: html/tppccrNormalize.html (332 bytes security) (deflated 50%) adding: html/tppccrNormalizeToReference.html (332 bytes security) (deflated 59%) adding: html/tppccrPlotCurves.html (332 bytes security) (deflated 63%) adding: html/tppccrResultTable.html (332 bytes security) (deflated 58%) adding: html/tppccrTransform.html (332 bytes security) (deflated 58%) adding: html/tppDefaultTheme.html (332 bytes security) (deflated 50%) adding: html/tppExport.html (332 bytes security) (deflated 55%) adding: html/tppQCPlotsCorrelateExperiments.html (332 bytes security) (deflated 57%) adding: html/tppRefData.html (332 bytes security) (deflated 44%) adding: html/tpptrAnalyzeMeltingCurves.html (332 bytes security) (deflated 54%) adding: html/tpptrCurveFit.html (332 bytes security) (deflated 60%) adding: html/tpptrDefaultNormReqs.html (332 bytes security) (deflated 49%) adding: html/tpptrFitSplines.html (332 bytes security) (deflated 57%) adding: html/tpptrFTest.html (332 bytes security) (deflated 54%) adding: html/tpptrImport.html (332 bytes security) (deflated 61%) adding: html/tpptrNormalize.html (332 bytes security) (deflated 58%) adding: html/tpptrPlotSplines.html (332 bytes security) (deflated 65%) adding: html/tpptrSplineFitAndTest.html (332 bytes security) (deflated 63%) adding: html/tpptrTidyUpESets.html (332 bytes security) (deflated 55%) adding: html/TPPTR_reference_results_HepG2.html (332 bytes security) (deflated 45%) adding: INDEX (332 bytes security) (deflated 73%) adding: MD5 (332 bytes security) (deflated 57%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 61%) adding: NEWS (332 bytes security) (deflated 59%) adding: R/ (372 bytes security) (stored 0%) adding: R/TPP (332 bytes security) (deflated 41%) adding: R/TPP.rdb (332 bytes security) (deflated 1%) adding: R/TPP.rdx (332 bytes security) (stored 0%) adding: test_data/ (372 bytes security) (stored 0%) adding: test_data/Panobinostat_2DTPP_smallExample.R (332 bytes security) (deflated 57%) adding: test_data/panobinostat_2DTPP_smallExample.RData (332 bytes security) (deflated 0%) adding: test_data/panobinostat_2D_fcResults.rds (332 bytes security) (deflated 0%) adding: test_data/panobinostat_2D_fcResults2.rds (332 bytes security) (stored 0%) adding: test_data/panobinostat_2D_fitResults.rds (332 bytes security) (deflated 1%) adding: test_data/panobinostat_2D_fitResults2.rds (332 bytes security) (stored 0%) adding: test_data/panobinostat_2D_fitResults3.rds (332 bytes security) (deflated 0%) adding: test_data/panobinostat_2D_importResults.rds (332 bytes security) (deflated 0%) adding: test_data/panobinostat_2D_importResults2.rds (332 bytes security) (stored 0%) adding: test_data/panobinostat_2D_normResults.rds (332 bytes security) (deflated 1%) adding: test_data/panobinostat_2D_normResults2.rds (332 bytes security) (deflated 14%) adding: test_data/panobinostat_2D_normResults3.rds (332 bytes security) (deflated 14%) adding: test_data/panobinostat_CCR_fitResults.rds (332 bytes security) (stored 0%) adding: test_data/panobinostat_ex_confg.txt (332 bytes security) (deflated 77%) adding: test_data/panobinostat_ex_confg2.txt (332 bytes security) (deflated 74%) adding: tpp2d_report.Rmd (332 bytes security) (deflated 54%)