J. Toedling
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/Ringo |
| Branch: RELEASE_3_6 |
| Last Commit: 505228e |
| Last Changed Date: 2018-04-02 13:46:50 -0400 (Mon, 02 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:18:39 -0400 (Thu, 12 Apr 2018).
| Package 1180/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Ringo 1.42.1 J. Toedling
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: Ringo |
| Version: 1.42.1 |
| Command: cd Ringo.buildbin-libdir/Ringo && zip -r ../../Ringo_1.42.1.zip . & cd ../.. |
| StartedAt: 2018-04-12 05:00:33 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 05:01:02 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 29.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: Ringo_1.42.1.zip |
| PackageFileSize: 2.885 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd Ringo.buildbin-libdir/Ringo && zip -r ../../Ringo_1.42.1.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: agilentData/ (372 bytes security) (stored 0%) adding: agilentData/arrayDescriptionAMEXP1029_part.txt (332 bytes security) (deflated 66%) adding: agilentData/H3K4Me3_Tc1Liver_sol1_mmChr17_part.txt (332 bytes security) (deflated 64%) adding: agilentData/mm9chr17.RData (332 bytes security) (deflated 0%) adding: agilentData/targets.txt (332 bytes security) (deflated 18%) adding: CITATION (332 bytes security) (deflated 46%) adding: DESCRIPTION (332 bytes security) (deflated 46%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 57%) adding: doc/Ringo.pdf (332 bytes security) (deflated 18%) adding: doc/Ringo.R (332 bytes security) (deflated 79%) adding: doc/Ringo.Rnw (332 bytes security) (deflated 64%) adding: exData/ (372 bytes security) (stored 0%) adding: exData/exampleProbeAnno.rda (332 bytes security) (deflated 13%) adding: exData/exampleX.rda (332 bytes security) (deflated 18%) adding: exData/example_targets.txt (332 bytes security) (deflated 23%) adding: exData/MOD_2003-12-05_SUZ12_1in2.ndf (332 bytes security) (deflated 73%) adding: exData/MOD_2003-12-05_SUZ12_1in2.pos (332 bytes security) (deflated 89%) adding: exData/MOD_20551_PMT1_pair.txt (332 bytes security) (deflated 82%) adding: exData/MOD_20742_PMT1_pair.txt (332 bytes security) (deflated 82%) adding: exData/README.txt (332 bytes security) (deflated 48%) adding: exData/reportersInexactMatchesHg18.rda (332 bytes security) (deflated 20%) adding: exData/spottypes.txt (332 bytes security) (deflated 29%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 73%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: help/Ringo.rdb (332 bytes security) (deflated 1%) adding: help/Ringo.rdx (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 84%) adding: html/arrayImage.html (332 bytes security) (deflated 62%) adding: html/asExprSet.html (332 bytes security) (deflated 56%) adding: html/autocorr.html (332 bytes security) (deflated 63%) adding: html/cherByThreshold.html (332 bytes security) (deflated 56%) adding: html/cherClass.html (332 bytes security) (deflated 63%) adding: html/chipAlongChrom.html (332 bytes security) (deflated 66%) adding: html/chipAlongChromOld.html (332 bytes security) (deflated 65%) adding: html/computeRunningMedians.html (332 bytes security) (deflated 63%) adding: html/compute_gc.html (332 bytes security) (deflated 53%) adding: html/compute_sliding_t.html (332 bytes security) (deflated 59%) adding: html/corrPlot.html (332 bytes security) (deflated 60%) adding: html/exportCherList.html (332 bytes security) (deflated 56%) adding: html/extractProbeAnno.html (332 bytes security) (deflated 55%) adding: html/features2Probes.html (332 bytes security) (deflated 58%) adding: html/findChersOnSmoothed.html (332 bytes security) (deflated 62%) adding: html/ftr2xys.html (332 bytes security) (deflated 54%) adding: html/getFeats.html (332 bytes security) (deflated 51%) adding: html/newCER.html (332 bytes security) (deflated 61%) adding: html/nimblegenNorm.html (332 bytes security) (deflated 50%) adding: html/nonzero.html (332 bytes security) (deflated 57%) adding: html/plotAutocorr.html (332 bytes security) (deflated 56%) adding: html/plotBM.html (332 bytes security) (deflated 55%) adding: html/plot_cher.html (332 bytes security) (deflated 56%) adding: html/posToProbeAnnoEnvironment.html (332 bytes security) (deflated 62%) adding: html/preprocess.html (332 bytes security) (deflated 66%) adding: html/probeAnnoClass.html (332 bytes security) (deflated 60%) adding: html/qopS4.html (332 bytes security) (deflated 62%) adding: html/quantilesOverPositions.html (332 bytes security) (deflated 58%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/readNimblegen.html (332 bytes security) (deflated 57%) adding: html/regionoverlap.html (332 bytes security) (deflated 63%) adding: html/relateCERs.html (332 bytes security) (deflated 55%) adding: html/Ringo-internal.html (332 bytes security) (deflated 41%) adding: html/sigGOTable.html (332 bytes security) (deflated 60%) adding: html/sliding_meansd.html (332 bytes security) (deflated 60%) adding: html/sliding_quantile.html (332 bytes security) (deflated 60%) adding: html/twoGaussiansNull.html (332 bytes security) (deflated 59%) adding: html/upperBoundNull.html (332 bytes security) (deflated 60%) adding: html/validProbeAnno.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 65%) adding: libs/ (372 bytes security) (stored 0%) adding: libs/i386/ (372 bytes security) (stored 0%) adding: libs/i386/Ringo.dll (332 bytes security) (deflated 60%) adding: libs/x64/ (372 bytes security) (stored 0%) adding: libs/x64/Ringo.dll (332 bytes security) (deflated 73%) adding: MD5 (332 bytes security) (deflated 46%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 55%) adding: R/ (372 bytes security) (stored 0%) adding: R/Ringo (332 bytes security) (deflated 41%) adding: R/Ringo.rdb (332 bytes security) (deflated 24%) adding: R/Ringo.rdx (332 bytes security) (deflated 0%) adding: scripts/ (372 bytes security) (stored 0%) adding: scripts/condenseBlatOutput.pl (332 bytes security) (deflated 49%) adding: scripts/condenseExonerateOutput.pl (332 bytes security) (deflated 54%) adding: scripts/condenseMUMmerOutput.pl (332 bytes security) (deflated 55%) adding: scripts/convertSampleKeyTxt.R (332 bytes security) (deflated 53%) adding: scripts/extractProbeSequenceFasta.pl (332 bytes security) (deflated 49%) adding: scripts/graphChers2Transcripts.R (332 bytes security) (deflated 63%) adding: scripts/makeProbeAnno.R (332 bytes security) (deflated 47%) adding: scripts/mapReportersWithBiostrings.R (332 bytes security) (deflated 69%) adding: scripts/retrieveGenomicFeatureAnnotation.R (332 bytes security) (deflated 61%)