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INSTALL report for RCy3 on tokay1

This page was generated on 2018-04-12 13:27:04 -0400 (Thu, 12 Apr 2018).

Package 1138/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RCy3 1.8.0
Tanja Muetze , Georgi Kolishovski , Paul Shannon
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/RCy3
Branch: RELEASE_3_6
Last Commit: 67a8847
Last Changed Date: 2017-10-30 12:41:08 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: RCy3
Version: 1.8.0
Command: rm -rf RCy3.buildbin-libdir && mkdir RCy3.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/RCy3_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=RCy3.buildbin-libdir --merge-multiarch RCy3_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL RCy3_1.8.0.zip && rm RCy3_1.8.0.tar.gz RCy3_1.8.0.zip
StartedAt: 2018-04-11 18:17:47 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:22:32 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 285.1 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   rm -rf RCy3.buildbin-libdir && mkdir RCy3.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/RCy3_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=RCy3.buildbin-libdir --merge-multiarch RCy3_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL RCy3_1.8.0.zip  && rm RCy3_1.8.0.tar.gz RCy3_1.8.0.zip
###
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100  262k  100  262k    0     0  9933k      0 --:--:-- --:--:-- --:--:-- 11.6M

install for i386

* installing *source* package 'RCy3' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'RCy3'
    finding HTML links ... done
    CytoscapeConnection                     html  
    CytoscapeConnectionClass-class          html  
    CytoscapeWindow                         html  
    CytoscapeWindowClass-class              html  
    addCyEdge                               html  
    addCyNode                               html  
    addGraphToGraph                         html  
    clearSelection                          html  
    copyVisualStyle                         html  
    createWindow                            html  
    createWindowFromSelection               html  
    cy2.edge.names                          html  
    cyPlot                                  html  
    deleteAllWindows                        html  
    deleteEdgeAttribute                     html  
    deleteNodeAttribute                     html  
    deleteSelectedEdges                     html  
    deleteSelectedNodes                     html  
    deleteWindow                            html  
    demoSimpleGraph                         html  
    displayGraph                            html  
    dockPanel                               html  
    eda                                     html  
    eda.names                               html  
    existing.CytoscapeWindow                html  
    fitContent                              html  
    fitSelectedContent                      html  
    floatPanel                              html  
    getAdjacentEdgeNames                    html  
    getAllEdgeAttributes                    html  
    getAllEdges                             html  
    getAllNodeAttributes                    html  
    getAllNodes                             html  
    getArrowShapes                          html  
    getAttributeClassNames                  html  
    getCenter                               html  
    getDefaultBackgroundColor               html  
    getDefaultEdgeReverseSelectionColor     html  
    getDefaultEdgeSelectionColor            html  
    getDefaultNodeReverseSelectionColor     html  
    getDefaultNodeSelectionColor            html  
    getDirectlyModifiableVisualProperties   html  
    getEdgeAttribute                        html  
    getEdgeAttributeNames                   html  
    getEdgeCount                            html  
    getFirstNeighbors                       html  
    getGraph                                html  
    getGraphFromCyWindow                    html  
    getLayoutNameMapping                    html  
    getLayoutNames                          html  
    getLayoutPropertyNames                  html  
    getLayoutPropertyType                   html  
    getLayoutPropertyValue                  html  
    getLineStyles                           html  
    getNodeAttribute                        html  
    getNodeAttributeNames                   html  
    getNodeCount                            html  
    getNodePosition                         html  
    getNodeShapes                           html  
    getNodeSize                             html  
    getSelectedEdgeCount                    html  
    getSelectedEdges                        html  
    getSelectedNodeCount                    html  
    getSelectedNodes                        html  
    getViewCoordinates                      html  
    getVisualStyleNames                     html  
    getWindowCount                          html  
    getWindowID                             html  
    getWindowList                           html  
    getZoom                                 html  
    hideAllPanels                           html  
    hideNodes                               html  
    hidePanel                               html  
    hideSelectedEdges                       html  
    hideSelectedNodes                       html  
    initEdgeAttribute                       html  
    initNodeAttribute                       html  
    invertEdgeSelection                     html  
    invertNodeSelection                     html  
    layoutNetwork                           html  
    lockNodeDimensions                      html  
    makeRandomGraph                         html  
    makeSimpleGraph                         html  
    noa                                     html  
    noa.names                               html  
    ping                                    html  
    pluginVersion                           html  
    predictTimeToDisplayGraph               html  
    raiseWindow                             html  
    redraw                                  html  
    restoreLayout                           html  
    saveImage                               html  
    saveLayout                              html  
    saveNetwork                             html  
    selectEdges                             html  
    selectFirstNeighborsOfSelectedNodes     html  
    selectNodes                             html  
    sendEdges                               html  
    sendNodes                               html  
    setCenter                               html  
    setDefaultBackgroundColor               html  
    setDefaultEdgeColor                     html  
    setDefaultEdgeFontSize                  html  
    setDefaultEdgeLineWidth                 html  
    setDefaultEdgeReverseSelectionColor     html  
    setDefaultEdgeSelectionColor            html  
    setDefaultEdgeSourceArrowColor          html  
    setDefaultEdgeTargetArrowColor          html  
    setDefaultNodeBorderColor               html  
    setDefaultNodeBorderWidth               html  
    setDefaultNodeColor                     html  
    setDefaultNodeFontSize                  html  
    setDefaultNodeLabelColor                html  
    setDefaultNodeReverseSelectionColor     html  
    setDefaultNodeSelectionColor            html  
    setDefaultNodeShape                     html  
    setDefaultNodeSize                      html  
    setEdgeAttributes                       html  
    setEdgeAttributesDirect                 html  
    setEdgeColorDirect                      html  
    setEdgeColorRule                        html  
    setEdgeFontSizeDirect                   html  
    setEdgeLabelColorDirect                 html  
    setEdgeLabelDirect                      html  
    setEdgeLabelOpacityDirect               html  
    setEdgeLabelRule                        html  
    setEdgeLineStyleDirect                  html  
    setEdgeLineStyleRule                    html  
    setEdgeLineWidthDirect                  html  
    setEdgeLineWidthRule                    html  
    setEdgeOpacityDirect                    html  
    setEdgeOpacityRule                      html  
    setEdgeSourceArrowColorDirect           html  
    setEdgeSourceArrowColorRule             html  
    setEdgeSourceArrowOpacityDirect         html  
    setEdgeSourceArrowRule                  html  
    setEdgeSourceArrowShapeDirect           html  
    setEdgeTargetArrowColorDirect           html  
    setEdgeTargetArrowColorRule             html  
    setEdgeTargetArrowOpacityDirect         html  
    setEdgeTargetArrowRule                  html  
    setEdgeTargetArrowShapeDirect           html  
    setEdgeTooltipDirect                    html  
    setEdgeTooltipRule                      html  
    setGraph                                html  
    setLayoutProperties                     html  
    setNodeAttributes                       html  
    setNodeAttributesDirect                 html  
    setNodeBorderColorDirect                html  
    setNodeBorderColorRule                  html  
    setNodeBorderOpacityDirect              html  
    setNodeBorderWidthDirect                html  
    setNodeBorderWidthRule                  html  
    setNodeColorDirect                      html  
    setNodeColorRule                        html  
    setNodeFillOpacityDirect                html  
    setNodeFontSizeDirect                   html  
    setNodeHeightDirect                     html  
    setNodeImageDirect                      html  
    setNodeLabelColorDirect                 html  
    setNodeLabelDirect                      html  
    setNodeLabelOpacityDirect               html  
    setNodeLabelRule                        html  
    setNodeOpacityDirect                    html  
    setNodeOpacityRule                      html  
    setNodePosition                         html  
    setNodeShapeDirect                      html  
    setNodeShapeRule                        html  
    setNodeSizeDirect                       html  
    setNodeSizeRule                         html  
    setNodeTooltipRule                      html  
    setNodeWidthDirect                      html  
    setTooltipDismissDelay                  html  
    setTooltipInitialDelay                  html  
    setVisualStyle                          html  
    setWindowSize                           html  
    setZoom                                 html  
    showGraphicsDetails                     html  
    unhideAll                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'RCy3' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RCy3' as RCy3_1.8.0.zip
* DONE (RCy3)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'RCy3' successfully unpacked and MD5 sums checked
In R CMD INSTALL