Solaiappan Manimaran
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/PathoStat |
| Branch: RELEASE_3_6 |
| Last Commit: 3911148 |
| Last Changed Date: 2017-12-06 23:55:55 -0400 (Wed, 06 Dec 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:28:53 -0400 (Thu, 12 Apr 2018).
| Package 1005/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| PathoStat 1.4.1 Solaiappan Manimaran
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: PathoStat |
| Version: 1.4.1 |
| Command: cd PathoStat.buildbin-libdir/PathoStat && zip -r ../../PathoStat_1.4.1.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:55:59 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:56:29 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 30.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: PathoStat_1.4.1.zip |
| PackageFileSize: 4.637 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd PathoStat.buildbin-libdir/PathoStat && zip -r ../../PathoStat_1.4.1.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/asthma_pstat_data.rda (332 bytes security) (stored 0%) adding: data/pstat_data.rda (332 bytes security) (stored 0%) adding: data/pstat_data_2_L1.rda (332 bytes security) (stored 0%) adding: data/pstat_data_2_L2.rda (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 47%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/index.html (332 bytes security) (deflated 73%) adding: doc/PathoStatAdvanced.html (332 bytes security) (deflated 63%) adding: doc/PathoStatAdvanced.R (332 bytes security) (deflated 65%) adding: doc/PathoStatAdvanced.Rmd (332 bytes security) (deflated 58%) adding: doc/PathoStatIntro.html (332 bytes security) (deflated 70%) adding: doc/PathoStatIntro.Rmd (332 bytes security) (deflated 52%) adding: doc/PathoStatUserManual.pdf (332 bytes security) (deflated 6%) adding: doc/PathoStatUserManual.R (332 bytes security) (deflated 69%) adding: doc/PathoStatUserManual.Rmd (332 bytes security) (deflated 60%) adding: example/ (372 bytes security) (stored 0%) adding: example/data/ (372 bytes security) (stored 0%) adding: example/data/Sample_01_1-sam-report.tsv (332 bytes security) (deflated 71%) adding: example/data/Sample_01_2-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/Sample_01_3-sam-report.tsv (332 bytes security) (deflated 71%) adding: example/data/Sample_02_1-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/Sample_02_2-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/Sample_02_3-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/Sample_03_1-sam-report.tsv (332 bytes security) (deflated 71%) adding: example/data/Sample_03_2-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/Sample_03_3-sam-report.tsv (332 bytes security) (deflated 70%) adding: example/data/sample_data.tsv (332 bytes security) (deflated 52%) adding: example/pathostat_pipeline.R (332 bytes security) (deflated 75%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 68%) adding: help/PathoStat.rdb (332 bytes security) (deflated 3%) adding: help/PathoStat.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 73%) adding: html/coreOTU.html (332 bytes security) (deflated 53%) adding: html/coreOTUModule.html (332 bytes security) (deflated 65%) adding: html/coreOTUModuleUI.html (332 bytes security) (deflated 57%) adding: html/coreOTUNormalize.html (332 bytes security) (deflated 56%) adding: html/coreOTUQuantile.html (332 bytes security) (deflated 55%) adding: html/createPathoStat.html (332 bytes security) (deflated 57%) adding: html/findRAfromCount.html (332 bytes security) (deflated 51%) adding: html/findTaxonLevel.html (332 bytes security) (deflated 50%) adding: html/findTaxonLevelData.html (332 bytes security) (deflated 54%) adding: html/findTaxonMat.html (332 bytes security) (deflated 53%) adding: html/findTaxonomy.html (332 bytes security) (deflated 50%) adding: html/formatTaxTable.html (332 bytes security) (deflated 49%) adding: html/getShinyInput.html (332 bytes security) (deflated 50%) adding: html/getShinyInputCombat.html (332 bytes security) (deflated 52%) adding: html/getShinyInputOrig.html (332 bytes security) (deflated 51%) adding: html/get_core.html (332 bytes security) (deflated 54%) adding: html/get_coremat.html (332 bytes security) (deflated 53%) adding: html/get_coremat_lineplot.html (332 bytes security) (deflated 48%) adding: html/grepTid.html (332 bytes security) (deflated 48%) adding: html/loadPathoscopeReports.html (332 bytes security) (deflated 65%) adding: html/loadPstat.html (332 bytes security) (deflated 52%) adding: html/log2CPM.html (332 bytes security) (deflated 53%) adding: html/PathoStat-class.html (332 bytes security) (deflated 53%) adding: html/pathostat.html (332 bytes security) (deflated 51%) adding: html/plotConfRegion.html (332 bytes security) (deflated 59%) adding: html/pstat_data.html (332 bytes security) (deflated 50%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/readPathoscopeData.html (332 bytes security) (deflated 56%) adding: html/runPathoStat.html (332 bytes security) (deflated 60%) adding: html/savePstat.html (332 bytes security) (deflated 54%) adding: html/setShinyInput.html (332 bytes security) (deflated 51%) adding: html/setShinyInputCombat.html (332 bytes security) (deflated 52%) adding: html/setShinyInputOrig.html (332 bytes security) (deflated 52%) adding: html/sizeNormalize.html (332 bytes security) (deflated 51%) adding: INDEX (332 bytes security) (deflated 69%) adding: MD5 (332 bytes security) (deflated 52%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 67%) adding: NEWS.Rd (332 bytes security) (deflated 49%) adding: R/ (372 bytes security) (stored 0%) adding: R/PathoStat (332 bytes security) (deflated 41%) adding: R/PathoStat.rdb (332 bytes security) (deflated 4%) adding: R/PathoStat.rdx (332 bytes security) (stored 0%) adding: reports/ (372 bytes security) (stored 0%) adding: reports/libs/ (372 bytes security) (stored 0%) adding: reports/libs/bootstrap/ (372 bytes security) (stored 0%) adding: reports/libs/bootstrap/css/ (372 bytes security) (stored 0%) adding: reports/libs/bootstrap/css/bootstrap-responsive.min.css (332 bytes security) (deflated 76%) adding: reports/libs/bootstrap/css/bootstrap.min.css (332 bytes security) (deflated 84%) adding: reports/libs/bootstrap/css/user.css (332 bytes security) (deflated 60%) adding: reports/libs/bootstrap/javascript/ (372 bytes security) (stored 0%) adding: reports/libs/bootstrap/javascript/bootstrap.min.js (332 bytes security) (deflated 74%) adding: reports/libs/bootstrap/javascript/jquery-1.10.1.min.js (332 bytes security) (deflated 65%) adding: reports/libs/bootstrap/javascript/user.js (332 bytes security) (deflated 54%) adding: reports/PathoStat.html (332 bytes security) (deflated 60%) adding: reports/pathostat_report.Rmd (332 bytes security) (deflated 43%) adding: shiny/ (372 bytes security) (stored 0%) adding: shiny/PathoStat/ (372 bytes security) (stored 0%) adding: shiny/PathoStat/server.R (332 bytes security) (deflated 77%) adding: shiny/PathoStat/ui.R (332 bytes security) (deflated 79%)