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BUILD BIN report for MADSEQ on tokay1

This page was generated on 2018-04-12 13:28:14 -0400 (Thu, 12 Apr 2018).

Package 773/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MADSEQ 1.4.1
Yu Kong
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/MADSEQ
Branch: RELEASE_3_6
Last Commit: bc330cb
Last Changed Date: 2017-10-31 11:56:54 -0400 (Tue, 31 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: MADSEQ
Version: 1.4.1
Command: cd MADSEQ.buildbin-libdir/MADSEQ && zip -r ../../MADSEQ_1.4.1.zip . & cd ../..
StartedAt: 2018-04-12 04:48:51 -0400 (Thu, 12 Apr 2018)
EndedAt: 2018-04-12 04:49:29 -0400 (Thu, 12 Apr 2018)
EllapsedTime: 37.5 seconds
RetCode: 0
Status:  OK  
PackageFile: MADSEQ_1.4.1.zip
PackageFileSize: 3.992 MiB

Command output

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###
### Running command:
###
###   cd MADSEQ.buildbin-libdir/MADSEQ && zip -r ../../MADSEQ_1.4.1.zip . & cd ../..
###
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  adding: data/ (372 bytes security) (stored 0%)
  adding: data/Rdata.rdb (332 bytes security) (deflated 0%)
  adding: data/Rdata.rds (332 bytes security) (deflated 1%)
  adding: data/Rdata.rdx (332 bytes security) (stored 0%)
  adding: DESCRIPTION (332 bytes security) (deflated 44%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/index.html (332 bytes security) (deflated 59%)
  adding: doc/MADSEQ-vignette.html (332 bytes security) (deflated 61%)
  adding: doc/MADSEQ-vignette.R (332 bytes security) (deflated 75%)
  adding: doc/MADSEQ-vignette.Rmd (332 bytes security) (deflated 70%)
  adding: extdata/ (372 bytes security) (stored 0%)
  adding: extdata/aneuploidy.bam (332 bytes security) (deflated 0%)
  adding: extdata/aneuploidy.bam.bai (332 bytes security) (deflated 98%)
  adding: extdata/aneuploidy.vcf.gz (332 bytes security) (stored 0%)
  adding: extdata/aneuploidy.vcf.gz.tbi (332 bytes security) (deflated 2%)
  adding: extdata/aneuploidy.vcf1.gz (332 bytes security) (stored 0%)
  adding: extdata/normal.bam (332 bytes security) (deflated 0%)
  adding: extdata/normal.bam.bai (332 bytes security) (deflated 98%)
  adding: extdata/normal.vcf.gz (332 bytes security) (stored 0%)
  adding: extdata/target.bed (332 bytes security) (deflated 64%)
  adding: gap/ (372 bytes security) (stored 0%)
  adding: gap/hg19_gap_gr.RDS (332 bytes security) (stored 0%)
  adding: gap/hg38_gap_gr.RDS (332 bytes security) (stored 0%)
  adding: gap/hs37d5_gap_gr.RDS (332 bytes security) (stored 0%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 66%)
  adding: help/MADSEQ.rdb (332 bytes security) (deflated 1%)
  adding: help/MADSEQ.rdx (332 bytes security) (stored 0%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 73%)
  adding: html/aneuploidy_chr18.html (332 bytes security) (deflated 50%)
  adding: html/deltaBIC.html (332 bytes security) (deflated 53%)
  adding: html/MADSEQ-package.html (332 bytes security) (deflated 51%)
  adding: html/MadSeq.html (332 bytes security) (deflated 60%)
  adding: html/normalizeCoverage.html (332 bytes security) (deflated 72%)
  adding: html/plotFraction.html (332 bytes security) (deflated 58%)
  adding: html/plotMadSeq.html (332 bytes security) (deflated 56%)
  adding: html/plotMixture.html (332 bytes security) (deflated 56%)
  adding: html/posterior.html (332 bytes security) (deflated 55%)
  adding: html/prepareCoverageGC.html (332 bytes security) (deflated 60%)
  adding: html/prepareHetero.html (332 bytes security) (deflated 63%)
  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: html/runMadSeq.html (332 bytes security) (deflated 67%)
  adding: html/summary-method.html (332 bytes security) (deflated 51%)
  adding: INDEX (332 bytes security) (deflated 62%)
  adding: MD5 (332 bytes security) (deflated 46%)
  adding: Meta/ (372 bytes security) (stored 0%)
  adding: Meta/data.rds (332 bytes security) (stored 0%)
  adding: Meta/features.rds (332 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
  adding: Meta/links.rds (332 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
  adding: Meta/package.rds (332 bytes security) (stored 0%)
  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 65%)
  adding: NEWS (332 bytes security) (stored 0%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/MADSEQ (332 bytes security) (deflated 41%)
  adding: R/MADSEQ.rdb (332 bytes security) (deflated 30%)
  adding: R/MADSEQ.rdx (332 bytes security) (stored 0%)
  adding: rjags/ (372 bytes security) (stored 0%)
  adding: rjags/FourMix.txt (332 bytes security) (deflated 50%)
  adding: rjags/LOH.txt (332 bytes security) (deflated 59%)
  adding: rjags/OneMix.txt (332 bytes security) (deflated 42%)
  adding: rjags/TwoMixMonosomy.txt (332 bytes security) (deflated 51%)
  adding: rjags/TwoMixTrisomy.txt (332 bytes security) (deflated 51%)