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BUILD BIN report for GenomicAlignments on tokay1

This page was generated on 2018-04-12 13:23:37 -0400 (Thu, 12 Apr 2018).

Package 562/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicAlignments 1.14.2
Bioconductor Package Maintainer
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/GenomicAlignments
Branch: RELEASE_3_6
Last Commit: 57b0b35
Last Changed Date: 2018-03-26 21:49:57 -0400 (Mon, 26 Mar 2018)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GenomicAlignments
Version: 1.14.2
Command: cd GenomicAlignments.buildbin-libdir/GenomicAlignments && zip -r ../../GenomicAlignments_1.14.2.zip . & cd ../..
StartedAt: 2018-04-12 04:41:44 -0400 (Thu, 12 Apr 2018)
EndedAt: 2018-04-12 04:42:22 -0400 (Thu, 12 Apr 2018)
EllapsedTime: 37.8 seconds
RetCode: 0
Status:  OK  
PackageFile: GenomicAlignments_1.14.2.zip
PackageFileSize: 3.628 MiB

Command output

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### Running command:
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###   cd GenomicAlignments.buildbin-libdir/GenomicAlignments && zip -r ../../GenomicAlignments_1.14.2.zip . & cd ../..
###
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  adding: CITATION (332 bytes security) (deflated 56%)
  adding: DESCRIPTION (332 bytes security) (deflated 51%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/GenomicAlignmentsIntroduction.pdf (332 bytes security) (deflated 8%)
  adding: doc/GenomicAlignmentsIntroduction.R (332 bytes security) (deflated 73%)
  adding: doc/GenomicAlignmentsIntroduction.Rnw (332 bytes security) (deflated 62%)
  adding: doc/index.html (332 bytes security) (deflated 78%)
  adding: doc/OverlapEncodings.pdf (332 bytes security) (deflated 15%)
  adding: doc/OverlapEncodings.R (332 bytes security) (deflated 85%)
  adding: doc/OverlapEncodings.Rnw (332 bytes security) (deflated 77%)
  adding: doc/summarizeOverlaps.pdf (332 bytes security) (deflated 8%)
  adding: doc/summarizeOverlaps.R (332 bytes security) (deflated 73%)
  adding: doc/summarizeOverlaps.Rnw (332 bytes security) (deflated 63%)
  adding: doc/WorkingWithAlignedNucleotides.pdf (332 bytes security) (deflated 8%)
  adding: doc/WorkingWithAlignedNucleotides.R (332 bytes security) (deflated 80%)
  adding: doc/WorkingWithAlignedNucleotides.Rnw (332 bytes security) (deflated 68%)
  adding: extdata/ (372 bytes security) (stored 0%)
  adding: extdata/sm_treated1.bam (332 bytes security) (deflated 0%)
  adding: extdata/sm_untreated1.bam (332 bytes security) (deflated 0%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 88%)
  adding: help/GenomicAlignments.rdb (332 bytes security) (deflated 1%)
  adding: help/GenomicAlignments.rdx (332 bytes security) (stored 0%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 91%)
  adding: html/cigar-utils.html (332 bytes security) (deflated 75%)
  adding: html/coordinate-mapping-methods.html (332 bytes security) (deflated 69%)
  adding: html/coverage-methods.html (332 bytes security) (deflated 73%)
  adding: html/encodeOverlaps-methods.html (332 bytes security) (deflated 71%)
  adding: html/findCompatibleOverlaps-methods.html (332 bytes security) (deflated 62%)
  adding: html/findMateAlignment.html (332 bytes security) (deflated 69%)
  adding: html/findOverlaps-methods.html (332 bytes security) (deflated 69%)
  adding: html/findSpliceOverlaps-methods.html (332 bytes security) (deflated 67%)
  adding: html/GAlignmentPairs-class.html (332 bytes security) (deflated 72%)
  adding: html/GAlignments-class.html (332 bytes security) (deflated 72%)
  adding: html/GAlignmentsList-class.html (332 bytes security) (deflated 74%)
  adding: html/GappedReads-class.html (332 bytes security) (deflated 57%)
  adding: html/intra-range-methods.html (332 bytes security) (deflated 69%)
  adding: html/junctions-methods.html (332 bytes security) (deflated 73%)
  adding: html/OverlapEncodings-class.html (332 bytes security) (deflated 70%)
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  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: html/readGAlignments.html (332 bytes security) (deflated 72%)
  adding: html/sequenceLayer.html (332 bytes security) (deflated 71%)
  adding: html/setops-methods.html (332 bytes security) (deflated 61%)
  adding: html/stackStringsFromBam.html (332 bytes security) (deflated 69%)
  adding: html/summarizeOverlaps-methods.html (332 bytes security) (deflated 73%)
  adding: INDEX (332 bytes security) (deflated 68%)
  adding: libs/ (372 bytes security) (stored 0%)
  adding: libs/i386/ (372 bytes security) (stored 0%)
  adding: libs/i386/GenomicAlignments.dll (332 bytes security) (deflated 64%)
  adding: libs/x64/ (372 bytes security) (stored 0%)
  adding: libs/x64/GenomicAlignments.dll (332 bytes security) (deflated 62%)
  adding: MD5 (332 bytes security) (deflated 52%)
  adding: Meta/ (372 bytes security) (stored 0%)
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  adding: NAMESPACE (332 bytes security) (deflated 72%)
  adding: NEWS (332 bytes security) (deflated 70%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/GenomicAlignments (332 bytes security) (deflated 41%)
  adding: R/GenomicAlignments.rdb (332 bytes security) (deflated 28%)
  adding: R/GenomicAlignments.rdx (332 bytes security) (deflated 3%)
  adding: unitTests/ (372 bytes security) (stored 0%)
  adding: unitTests/test_cigar-utils.R (332 bytes security) (deflated 82%)
  adding: unitTests/test_coordinate-mapping-methods.R (332 bytes security) (deflated 78%)
  adding: unitTests/test_findSpliceOverlaps-methods.R (332 bytes security) (deflated 87%)
  adding: unitTests/test_GAlignments-class.R (332 bytes security) (deflated 68%)
  adding: unitTests/test_GAlignmentsList-class.R (332 bytes security) (deflated 74%)
  adding: unitTests/test_intra-range-methods.R (332 bytes security) (deflated 67%)
  adding: unitTests/test_readGAlignmentPairs.R (332 bytes security) (deflated 73%)
  adding: unitTests/test_readGAlignments.R (332 bytes security) (deflated 71%)
  adding: unitTests/test_readGAlignmentsList.R (332 bytes security) (deflated 73%)
  adding: unitTests/test_summarizeOverlaps-methods.R (332 bytes security) (deflated 87%)