Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.6: INSTALL report for pRoloc on tokay1

This page was generated on 2017-08-16 13:31:00 -0400 (Wed, 16 Aug 2017).

Package 1031/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pRoloc 1.17.3
Laurent Gatto
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/pRoloc
Last Changed Rev: 129908 / Revision: 131943
Last Changed Date: 2017-05-26 08:07:04 -0400 (Fri, 26 May 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pRoloc
Version: 1.17.3
Command: rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/pRoloc_1.17.3.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=pRoloc.buildbin-libdir --merge-multiarch pRoloc_1.17.3.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.17.3.zip && rm pRoloc_1.17.3.tar.gz pRoloc_1.17.3.zip
StartedAt: 2017-08-15 18:52:06 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:52:58 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 52.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf pRoloc.buildbin-libdir && mkdir pRoloc.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/pRoloc_1.17.3.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=pRoloc.buildbin-libdir --merge-multiarch pRoloc_1.17.3.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL pRoloc_1.17.3.zip  && rm pRoloc_1.17.3.tar.gz pRoloc_1.17.3.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2186k  100 2186k    0     0  30.0M      0 --:--:-- --:--:-- --:--:-- 30.9M

install for i386

* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/RcppArmadillo/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=core2 -c pRoloc.cpp -o pRoloc.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'

install for x64

* installing *source* package 'pRoloc' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/RcppArmadillo/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=core2 -c pRoloc.cpp -o pRoloc.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o pRoloc.dll tmp.def pRoloc.o -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/pRoloc.buildbin-libdir/pRoloc/libs/x64
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
* MD5 sums
packaged installation of 'pRoloc' as pRoloc_1.17.3.zip
* DONE (pRoloc)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'pRoloc' successfully unpacked and MD5 sums checked