multtest 2.33.0
Katherine S. Pollard
| Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/multtest | | Last Changed Rev: 129129 / Revision: 131943 | | Last Changed Date: 2017-04-24 15:50:57 -0400 (Mon, 24 Apr 2017) |
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |  |
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
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### Running command:
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### rm -rf multtest.buildbin-libdir && mkdir multtest.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/multtest_2.33.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=multtest.buildbin-libdir --merge-multiarch multtest_2.33.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL multtest_2.33.0.zip && rm multtest_2.33.0.tar.gz multtest_2.33.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1269k 100 1269k 0 0 8409k 0 --:--:-- --:--:-- --:--:-- 8633k
install for i386
* installing *source* package 'multtest' ...
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c Rpack.c -o Rpack.o
Rpack.c: In function 'get_samples_T':
Rpack.c:139:17: warning: 'sd.test' may be used uninitialized in this function [-Wmaybe-uninitialized]
SAMPLING_DATA sd;
^
Rpack.c:143:3: warning: 'sd.fn_maxT' may be used uninitialized in this function [-Wmaybe-uninitialized]
get_all_samples_T(V,n,T,*pna,sd.fn_maxT,sd.fn_first,sd.fn_next,(void*)extra);
^
Rpack.c: In function 'get_samples_P':
Rpack.c:150:17: warning: 'sd.test' may be used uninitialized in this function [-Wmaybe-uninitialized]
SAMPLING_DATA sd;
^
Rpack.c:154:3: warning: 'sd.fn_minP' may be used uninitialized in this function [-Wmaybe-uninitialized]
get_all_samples_P(V,n,P,*pna,sd.fn_minP,sd.fn_first,sd.fn_next,sd.fn_cmp,(void*)extra);
^
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c VScount.c -o VScount.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c block_sampling_fixed.c -o block_sampling_fixed.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c bootloop.c -o bootloop.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c mt.c -o mt.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c pairt_sampling.c -o pairt_sampling.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c random.c -o random.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c sampling.c -o sampling.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c sampling_fixed.c -o sampling_fixed.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c stat_func.c -o stat_func.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O3 -Wall -std=gnu99 -mtune=core2 -c stat_order.c -o stat_order.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o multtest.dll tmp.def Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -LC:/local323/lib/i386 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/multtest.buildbin-libdir/multtest/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
install for x64
* installing *source* package 'multtest' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c Rpack.c -o Rpack.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c VScount.c -o VScount.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c block_sampling_fixed.c -o block_sampling_fixed.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c bootloop.c -o bootloop.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c mt.c -o mt.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c pairt_sampling.c -o pairt_sampling.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c pairt_sampling_fixed.c -o pairt_sampling_fixed.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c random.c -o random.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c sampling.c -o sampling.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c sampling_fixed.c -o sampling_fixed.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c stat_func.c -o stat_func.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -I"C:/local323/include" -DUSEDOUBLE -DWINDOWS -O2 -Wall -std=gnu99 -mtune=core2 -c stat_order.c -o stat_order.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o multtest.dll tmp.def Rpack.o VScount.o block_sampling_fixed.o bootloop.o mt.o pairt_sampling.o pairt_sampling_fixed.o random.o sampling.o sampling_fixed.o stat_func.o stat_order.o -lm -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.6-bioc/meat/multtest.buildbin-libdir/multtest/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'multtest' as multtest_2.33.0.zip
* DONE (multtest)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'multtest' successfully unpacked and MD5 sums checked