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BioC 3.6: BUILD BIN report for genomation on tokay1

This page was generated on 2017-08-16 13:33:50 -0400 (Wed, 16 Aug 2017).

Package 540/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
genomation 1.9.3
Altuna Akalin , Vedran Franke
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/genomation
Last Changed Rev: 130959 / Revision: 131943
Last Changed Date: 2017-07-05 05:03:06 -0400 (Wed, 05 Jul 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: genomation
Version: 1.9.3
Command: cd genomation.buildbin-libdir/genomation && zip -r ../../genomation_1.9.3.zip . & cd ../..
StartedAt: 2017-08-16 03:48:49 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 03:49:27 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 38.0 seconds
RetCode: 0
Status:  OK  
PackageFile: genomation_1.9.3.zip
PackageFileSize: 5.192 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd genomation.buildbin-libdir/genomation && zip -r ../../genomation_1.9.3.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (332 bytes security) (deflated 51%)
  adding: data/ (372 bytes security) (stored 0%)
  adding: data/cage.RData (332 bytes security) (deflated 0%)
  adding: data/cpgi.RData (332 bytes security) (stored 0%)
  adding: data/genes.RData (332 bytes security) (stored 0%)
  adding: data/promoters.RData (332 bytes security) (stored 0%)
  adding: DESCRIPTION (332 bytes security) (deflated 48%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/GenomationManual.html (332 bytes security) (deflated 43%)
  adding: doc/GenomationManual.R (332 bytes security) (deflated 79%)
  adding: doc/GenomationManual.Rmd (332 bytes security) (deflated 70%)
  adding: doc/index.html (332 bytes security) (deflated 60%)
  adding: extdata/ (372 bytes security) (stored 0%)
  adding: extdata/chr21.CpGi.hg19.bed (332 bytes security) (deflated 67%)
  adding: extdata/chr21.refseq.hg19.bed (332 bytes security) (deflated 71%)
  adding: extdata/chr21.refseq.hg19.gtf (332 bytes security) (deflated 94%)
  adding: extdata/EnhancersEncode.txt.Test (332 bytes security) (deflated 53%)
  adding: extdata/ex.broadPeak (332 bytes security) (deflated 38%)
  adding: extdata/ex.narrowPeak (332 bytes security) (deflated 40%)
  adding: extdata/Fantom4.Cage.Test (332 bytes security) (deflated 63%)
  adding: extdata/tab1.bed (332 bytes security) (deflated 40%)
  adding: extdata/tab2.bed (332 bytes security) (deflated 43%)
  adding: extdata/tab3.bed (332 bytes security) (deflated 46%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 85%)
  adding: help/genomation.rdb (332 bytes security) (deflated 1%)
  adding: help/genomation.rdx (332 bytes security) (stored 0%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 85%)
  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: INDEX (332 bytes security) (deflated 76%)
  adding: MD5 (332 bytes security) (deflated 47%)
  adding: Meta/ (372 bytes security) (stored 0%)
  adding: Meta/data.rds (332 bytes security) (stored 0%)
  adding: Meta/features.rds (332 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
  adding: Meta/links.rds (332 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
  adding: Meta/package.rds (332 bytes security) (stored 0%)
  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 68%)
  adding: NEWS (332 bytes security) (deflated 67%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/genomation (332 bytes security) (deflated 41%)
  adding: R/genomation.rdb (332 bytes security) (deflated 29%)
  adding: R/genomation.rdx (332 bytes security) (stored 0%)
  adding: scripts/ (372 bytes security) (stored 0%)
  adding: scripts/devtools_test.R (332 bytes security) (deflated 58%)
  adding: scripts/FunctionNames.txt (332 bytes security) (deflated 26%)
  adding: scripts/produceDataForExamples.R (332 bytes security) (deflated 64%)
  adding: tests/ (372 bytes security) (stored 0%)
  adding: unitTests/ (372 bytes security) (stored 0%)
  adding: unitTests/tab.test1 (332 bytes security) (deflated 14%)
  adding: unitTests/tab.test2 (332 bytes security) (deflated 21%)
  adding: unitTests/tab.test3 (332 bytes security) (deflated 16%)
  adding: unitTests/tab.test3.zip (332 bytes security) (stored 0%)
  adding: unitTests/tab.test4 (332 bytes security) (deflated 32%)
  adding: unitTests/test.bam (332 bytes security) (deflated 9%)
  adding: unitTests/test.bam.bai (332 bytes security) (deflated 69%)
  adding: unitTests/test.bedGraph (332 bytes security) (deflated 53%)
  adding: unitTests/test.bw (332 bytes security) (deflated 99%)
  adding: unitTests/test.gtf (332 bytes security) (deflated 65%)
  adding: unitTests/test_pairedend.bam (332 bytes security) (deflated 8%)
  adding: unitTests/test_pairedend.bam.bai (332 bytes security) (deflated 59%)
  adding: unitTests/test_PatternMatrix.R (332 bytes security) (deflated 79%)
  adding: unitTests/test_readData.R (332 bytes security) (deflated 76%)
  adding: unitTests/test_ScoreMatrix.R (332 bytes security) (deflated 77%)
  adding: unitTests/test_ScoreMatrixBin.R (332 bytes security) (deflated 78%)
  adding: unitTests/test_ScoreMatrixList.R (332 bytes security) (deflated 82%)