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BioC 3.6: BUILD BIN report for chimeraviz on tokay1

This page was generated on 2017-08-16 13:37:15 -0400 (Wed, 16 Aug 2017).

Package 206/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chimeraviz 1.2.2
Stian Lågstad
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/chimeraviz
Last Changed Rev: 130079 / Revision: 131943
Last Changed Date: 2017-06-02 10:51:30 -0400 (Fri, 02 Jun 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: chimeraviz
Version: 1.2.2
Command: cd chimeraviz.buildbin-libdir/chimeraviz && zip -r ../../chimeraviz_1.2.2.zip . & cd ../..
StartedAt: 2017-08-16 03:37:17 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 03:37:57 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 40.3 seconds
RetCode: 0
Status:  OK  
PackageFile: chimeraviz_1.2.2.zip
PackageFileSize: 5.629 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd chimeraviz.buildbin-libdir/chimeraviz && zip -r ../../chimeraviz_1.2.2.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: DESCRIPTION (332 bytes security) (deflated 55%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/chimeraviz-vignette.html (332 bytes security) (deflated 58%)
  adding: doc/chimeraviz-vignette.R (332 bytes security) (deflated 86%)
  adding: doc/chimeraviz-vignette.Rmd (332 bytes security) (deflated 75%)
  adding: doc/index.html (332 bytes security) (deflated 60%)
  adding: extdata/ (372 bytes security) (stored 0%)
  adding: extdata/5267readsAligned.bam (332 bytes security) (deflated 1%)
  adding: extdata/5267readsAligned.bam.bai (332 bytes security) (deflated 58%)
  adding: extdata/defuse_833ke_results.filtered.tsv (332 bytes security) (deflated 62%)
  adding: extdata/ericscript_SRR1657556.results.total.tsv (332 bytes security) (deflated 53%)
  adding: extdata/fusion5267and11759reads.bam (332 bytes security) (deflated 0%)
  adding: extdata/fusion5267and11759reads.bam.bai (332 bytes security) (deflated 99%)
  adding: extdata/fusion5267and11759reads.bedGraph (332 bytes security) (deflated 73%)
  adding: extdata/fusioncatcher_833ke_final-list-candidate-fusion-genes.txt (332 bytes security) (deflated 72%)
  adding: extdata/FusionMap_01_TestDataset_InputFastq.FusionReport.txt (332 bytes security) (deflated 62%)
  adding: extdata/Homo_sapiens.GRCh37.74.sqlite (332 bytes security) (deflated 81%)
  adding: extdata/Homo_sapiens.GRCh37.74_subset.gtf (332 bytes security) (deflated 95%)
  adding: extdata/infusion_fusions.txt (332 bytes security) (deflated 55%)
  adding: extdata/jaffa_results.csv (332 bytes security) (deflated 69%)
  adding: extdata/PRADA.acc.fusion.fq.TAF.tsv (332 bytes security) (deflated 56%)
  adding: extdata/protein_domains_5267.bed (332 bytes security) (deflated 54%)
  adding: extdata/reads.1.fq (332 bytes security) (deflated 71%)
  adding: extdata/reads.2.fq (332 bytes security) (deflated 84%)
  adding: extdata/reads_supporting_defuse_fusion_5267.1.fq (332 bytes security) (deflated 59%)
  adding: extdata/reads_supporting_defuse_fusion_5267.2.fq (332 bytes security) (deflated 61%)
  adding: extdata/soapfuse_833ke_final.Fusion.specific.for.genes (332 bytes security) (deflated 65%)
  adding: extdata/star-fusion.fusion_candidates.final.abridged.txt (332 bytes security) (deflated 62%)
  adding: extdata/UCSC.HG19.Human.CytoBandIdeogram.txt (332 bytes security) (deflated 80%)
  adding: extdata/UCSC.HG38.Human.CytoBandIdeogram.txt (332 bytes security) (deflated 80%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 77%)
  adding: help/chimeraviz.rdb (332 bytes security) (deflated 2%)
  adding: help/chimeraviz.rdx (332 bytes security) (stored 0%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 83%)
  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: INDEX (332 bytes security) (deflated 73%)
  adding: MD5 (332 bytes security) (deflated 47%)
  adding: Meta/ (372 bytes security) (stored 0%)
  adding: Meta/features.rds (332 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
  adding: Meta/links.rds (332 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
  adding: Meta/package.rds (332 bytes security) (stored 0%)
  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 65%)
  adding: NEWS (332 bytes security) (stored 0%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/chimeraviz (332 bytes security) (deflated 41%)
  adding: R/chimeraviz.rdb (332 bytes security) (deflated 6%)
  adding: R/chimeraviz.rdx (332 bytes security) (stored 0%)
  adding: reports/ (372 bytes security) (stored 0%)
  adding: reports/fusionListReport.Rmd (332 bytes security) (deflated 46%)
  adding: scripts/ (372 bytes security) (stored 0%)
  adding: scripts/bowtie.R (332 bytes security) (deflated 73%)
  adding: scripts/rsubread.R (332 bytes security) (deflated 69%)