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BioC 3.6: BUILD BIN report for SGSeq on tokay1

This page was generated on 2017-08-16 13:33:39 -0400 (Wed, 16 Aug 2017).

Package 1233/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SGSeq 1.11.2
Leonard Goldstein
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/SGSeq
Last Changed Rev: 130626 / Revision: 131943
Last Changed Date: 2017-06-22 18:34:50 -0400 (Thu, 22 Jun 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SGSeq
Version: 1.11.2
Command: cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.11.2.zip . & cd ../..
StartedAt: 2017-08-16 04:09:13 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 04:09:45 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 31.9 seconds
RetCode: 0
Status:  OK  
PackageFile: SGSeq_1.11.2.zip
PackageFileSize: 2.929 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SGSeq.buildbin-libdir/SGSeq && zip -r ../../SGSeq_1.11.2.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (332 bytes security) (deflated 53%)
  adding: data/ (372 bytes security) (stored 0%)
  adding: data/Rdata.rdb (332 bytes security) (deflated 33%)
  adding: data/Rdata.rds (332 bytes security) (stored 0%)
  adding: data/Rdata.rdx (332 bytes security) (stored 0%)
  adding: DESCRIPTION (332 bytes security) (deflated 45%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/index.html (332 bytes security) (deflated 58%)
  adding: doc/SGSeq.html (332 bytes security) (deflated 59%)
  adding: doc/SGSeq.R (332 bytes security) (deflated 79%)
  adding: doc/SGSeq.Rmd (332 bytes security) (deflated 67%)
  adding: extdata/ (372 bytes security) (stored 0%)
  adding: extdata/bams/ (372 bytes security) (stored 0%)
  adding: extdata/bams/N1.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/N1.bam.bai (332 bytes security) (deflated 99%)
  adding: extdata/bams/N2.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/N2.bam.bai (332 bytes security) (deflated 100%)
  adding: extdata/bams/N3.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/N3.bam.bai (332 bytes security) (deflated 99%)
  adding: extdata/bams/N4.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/N4.bam.bai (332 bytes security) (deflated 100%)
  adding: extdata/bams/T1.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/T1.bam.bai (332 bytes security) (deflated 100%)
  adding: extdata/bams/T2.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/T2.bam.bai (332 bytes security) (deflated 99%)
  adding: extdata/bams/T3.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/T3.bam.bai (332 bytes security) (deflated 99%)
  adding: extdata/bams/T4.bam (332 bytes security) (deflated 0%)
  adding: extdata/bams/T4.bam.bai (332 bytes security) (deflated 100%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 84%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: help/SGSeq.rdb (332 bytes security) (deflated 2%)
  adding: help/SGSeq.rdx (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 89%)
  adding: html/R.css (332 bytes security) (deflated 75%)
  adding: INDEX (332 bytes security) (deflated 69%)
  adding: MD5 (332 bytes security) (deflated 50%)
  adding: Meta/ (372 bytes security) (stored 0%)
  adding: Meta/data.rds (332 bytes security) (stored 0%)
  adding: Meta/features.rds (332 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (332 bytes security) (stored 0%)
  adding: Meta/links.rds (332 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
  adding: Meta/package.rds (332 bytes security) (stored 0%)
  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 65%)
  adding: NEWS (332 bytes security) (deflated 61%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/SGSeq (332 bytes security) (deflated 41%)
  adding: R/SGSeq.rdb (332 bytes security) (deflated 21%)
  adding: R/SGSeq.rdx (332 bytes security) (deflated 0%)
  adding: scripts/ (372 bytes security) (stored 0%)
  adding: scripts/createExampleData.R (332 bytes security) (deflated 66%)
  adding: unitTests/ (372 bytes security) (stored 0%)
  adding: unitTests/test_analyzeFeatures.R (332 bytes security) (deflated 31%)
  adding: unitTests/test_analyzeVariants.R (332 bytes security) (deflated 21%)
  adding: unitTests/test_annotate.R (332 bytes security) (deflated 49%)
  adding: unitTests/test_classes.R (332 bytes security) (deflated 71%)
  adding: unitTests/test_convertToSGFeatures.R (332 bytes security) (deflated 25%)
  adding: unitTests/test_convertToTxFeatures.R (332 bytes security) (deflated 42%)
  adding: unitTests/test_findSGVariants.R (332 bytes security) (deflated 86%)
  adding: unitTests/test_getBamInfo.R (332 bytes security) (deflated 37%)
  adding: unitTests/test_getSGFeatureCounts.R (332 bytes security) (deflated 33%)
  adding: unitTests/test_getSGVariantCounts.R (332 bytes security) (deflated 55%)
  adding: unitTests/test_mergeTxFeatures.R (332 bytes security) (deflated 36%)
  adding: unitTests/test_predictTxFeatures.R (332 bytes security) (deflated 30%)
  adding: unitTests/test_predictVariantEffects.R (332 bytes security) (deflated 72%)