Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q [R] S  T  U  V  W  X  Y  Z 

BioC 3.6: INSTALL report for ReportingTools on tokay1

This page was generated on 2017-08-16 13:30:49 -0400 (Wed, 16 Aug 2017).

Package 1117/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReportingTools 2.17.2
Jason A. Hackney , Gabriel Becker
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ReportingTools
Last Changed Rev: 131570 / Revision: 131943
Last Changed Date: 2017-07-25 16:25:37 -0400 (Tue, 25 Jul 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ReportingTools
Version: 2.17.2
Command: rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ReportingTools_2.17.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ReportingTools.buildbin-libdir --merge-multiarch ReportingTools_2.17.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.17.2.zip && rm ReportingTools_2.17.2.tar.gz ReportingTools_2.17.2.zip
StartedAt: 2017-08-15 18:42:11 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:43:18 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 67.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/ReportingTools_2.17.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=ReportingTools.buildbin-libdir --merge-multiarch ReportingTools_2.17.2.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL ReportingTools_2.17.2.zip  && rm ReportingTools_2.17.2.tar.gz ReportingTools_2.17.2.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1098k  100 1098k    0     0  18.4M      0 --:--:-- --:--:-- --:--:-- 19.5M

install for i386

* installing *source* package 'ReportingTools' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in "RSQLite" for requests: dbGetQuery
in method for 'objectToHTML' with signature 'object="ggbio"': no definition for class "ggbio"
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
** help
*** installing help indices
** building package indices
** installing vignettes
   'basicReportingTools.Rnw' 
   'microarrayAnalysis.Rnw' 
   'rnaseqAnalysis.Rnw' 
   'shiny.Rnw' 
   'knitr.Rmd' 
** testing if installed package can be loaded
No methods found in "RSQLite" for requests: dbGetQuery

install for x64

* installing *source* package 'ReportingTools' ...
** testing if installed package can be loaded
No methods found in "RSQLite" for requests: dbGetQuery
* MD5 sums
packaged installation of 'ReportingTools' as ReportingTools_2.17.2.zip
* DONE (ReportingTools)
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'ReportingTools' successfully unpacked and MD5 sums checked