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BioC 3.5: CHECK report for hypergraph on veracruz2

This page was generated on 2017-10-18 14:27:44 -0400 (Wed, 18 Oct 2017).

Package 643/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
hypergraph 1.48.0
Bioconductor Package Maintainer
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/hypergraph
Branch: RELEASE_3_5
Last Commit: a4c19ea
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK [ OK ] OK UNNEEDED, same version exists in internal repository

Summary

Package: hypergraph
Version: 1.48.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings hypergraph_1.48.0.tar.gz
StartedAt: 2017-10-18 04:53:57 -0400 (Wed, 18 Oct 2017)
EndedAt: 2017-10-18 04:54:27 -0400 (Wed, 18 Oct 2017)
EllapsedTime: 29.9 seconds
RetCode: 0
Status:  OK 
CheckDir: hypergraph.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings hypergraph_1.48.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.5-bioc/meat/hypergraph.Rcheck’
* using R version 3.4.2 (2017-09-28)
* using platform: x86_64-apple-darwin15.6.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘hypergraph/DESCRIPTION’ ... OK
* this is package ‘hypergraph’ version ‘1.48.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘hypergraph’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘hypergraph_unit_tests.R’
 OK
* checking PDF version of manual ... OK
* DONE

Status: OK

hypergraph.Rcheck/00install.out:

* installing *source* package ‘hypergraph’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (hypergraph)

hypergraph.Rcheck/hypergraph-Ex.timings:

nameusersystemelapsed
DirectedHyperedge-class0.0010.0000.001
Hyperedge-class0.0010.0000.001
Hypergraph-class0.0020.0000.002
kCores0.0220.0000.022
l2hel0.0010.0000.002
vCover0.0190.0000.021