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BioC 3.5: INSTALL report for GSVA on veracruz2

This page was generated on 2017-10-18 14:29:29 -0400 (Wed, 18 Oct 2017).

Package 605/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GSVA 1.24.2
Justin Guinney
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/GSVA
Branch: RELEASE_3_5
Last Commit: 12e129b
Last Changed Date: 2017-09-01 07:41:33 -0400 (Fri, 01 Sep 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GSVA
Version: 1.24.2
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL GSVA
StartedAt: 2017-10-17 18:03:49 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:03:58 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 9.5 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL GSVA
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library’
* installing *source* package ‘GSVA’ ...
** libs
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c kernel_estimation.c -o kernel_estimation.o
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c ks_test.c -o ks_test.o
ks_test.c:22:9: warning: unused variable 'mx_value' [-Wunused-variable]
        double mx_value = 0.0;
               ^
1 warning generated.
clang -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c register_cmethods.c -o register_cmethods.o
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o GSVA.so kernel_estimation.o ks_test.o register_cmethods.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.4/Resources/library/GSVA/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (GSVA)