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BioC 3.5: BUILD BIN report for methylKit on tokay2

This page was generated on 2017-08-16 13:25:59 -0400 (Wed, 16 Aug 2017).

Package 805/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
methylKit 1.2.0
Altuna Akalin
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/methylKit
Last Changed Rev: 129126 / Revision: 131943
Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: methylKit
Version: 1.2.0
Command: cd methylKit.buildbin-libdir/methylKit && zip -r ../../methylKit_1.2.0.zip . & cd ../..
StartedAt: 2017-08-16 04:40:28 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 04:41:02 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 34.4 seconds
RetCode: 0
Status:  OK  
PackageFile: methylKit_1.2.0.zip
PackageFileSize: 4.839 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd methylKit.buildbin-libdir/methylKit && zip -r ../../methylKit_1.2.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (264 bytes security) (deflated 51%)
  adding: data/ (304 bytes security) (stored 0%)
  adding: data/methylKit.RData (264 bytes security) (deflated 1%)
  adding: DESCRIPTION (264 bytes security) (deflated 49%)
  adding: doc/ (304 bytes security) (stored 0%)
  adding: doc/index.html (264 bytes security) (deflated 58%)
  adding: doc/methylKit.html (264 bytes security) (deflated 62%)
  adding: doc/methylKit.R (264 bytes security) (deflated 76%)
  adding: doc/methylKit.Rmd (264 bytes security) (deflated 67%)
  adding: extdata/ (304 bytes security) (stored 0%)
  adding: extdata/control1.myCpG.txt (264 bytes security) (deflated 80%)
  adding: extdata/control2.myCpG.txt (264 bytes security) (deflated 80%)
  adding: extdata/cpgi.hg18.bed.txt (264 bytes security) (deflated 67%)
  adding: extdata/ctrl.bismark_paired_end.sorted.bam (264 bytes security) (deflated 1%)
  adding: extdata/ctrl.bismark_paired_end.sorted.wh.sam (264 bytes security) (deflated 89%)
  adding: extdata/ctrl1.txt.bgz (264 bytes security) (deflated 1%)
  adding: extdata/ctrl2.txt.bgz (264 bytes security) (deflated 1%)
  adding: extdata/generic1.CpG.txt (264 bytes security) (deflated 40%)
  adding: extdata/refseq.hg18.bed.txt (264 bytes security) (deflated 68%)
  adding: extdata/test.bismark_single_end.sorted.bam (264 bytes security) (stored 0%)
  adding: extdata/test.bismark_single_end.sorted.wh.sam (264 bytes security) (deflated 86%)
  adding: extdata/test.fastq_bismark.sorted.min.sam (264 bytes security) (deflated 79%)
  adding: extdata/test.fastq_bismark.unsorted.min.sam (264 bytes security) (deflated 80%)
  adding: extdata/test1.myCpG.txt (264 bytes security) (deflated 78%)
  adding: extdata/test1.txt.bgz (264 bytes security) (deflated 0%)
  adding: extdata/test1.txt.bgz.tbi (264 bytes security) (stored 0%)
  adding: extdata/test1_test2_ctrl1_ctrl2.txt.bgz (264 bytes security) (stored 0%)
  adding: extdata/test1_test2_ctrl1_ctrl2_diffMeth.txt.bgz (264 bytes security) (deflated 0%)
  adding: extdata/test2.myCpG.txt (264 bytes security) (deflated 78%)
  adding: extdata/test2.txt.bgz (264 bytes security) (deflated 1%)
  adding: help/ (304 bytes security) (stored 0%)
  adding: help/aliases.rds (264 bytes security) (stored 0%)
  adding: help/AnIndex (264 bytes security) (deflated 88%)
  adding: help/methylKit.rdb (264 bytes security) (deflated 1%)
  adding: help/methylKit.rdx (264 bytes security) (stored 0%)
  adding: help/paths.rds (264 bytes security) (stored 0%)
  adding: html/ (304 bytes security) (stored 0%)
  adding: html/00Index.html (264 bytes security) (deflated 86%)
  adding: html/R.css (264 bytes security) (deflated 75%)
  adding: INDEX (264 bytes security) (deflated 72%)
  adding: libs/ (304 bytes security) (stored 0%)
  adding: libs/i386/ (304 bytes security) (stored 0%)
  adding: libs/i386/methylKit.dll (264 bytes security) (deflated 61%)
  adding: libs/x64/ (304 bytes security) (stored 0%)
  adding: libs/x64/methylKit.dll (264 bytes security) (deflated 66%)
  adding: MD5 (264 bytes security) (deflated 48%)
  adding: Meta/ (304 bytes security) (stored 0%)
  adding: Meta/data.rds (264 bytes security) (stored 0%)
  adding: Meta/features.rds (264 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
  adding: Meta/links.rds (264 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
  adding: Meta/package.rds (264 bytes security) (stored 0%)
  adding: Meta/Rd.rds (264 bytes security) (stored 0%)
  adding: Meta/vignette.rds (264 bytes security) (stored 0%)
  adding: NAMESPACE (264 bytes security) (deflated 74%)
  adding: NEWS (264 bytes security) (deflated 66%)
  adding: R/ (304 bytes security) (stored 0%)
  adding: R/methylKit (264 bytes security) (deflated 41%)
  adding: R/methylKit.rdb (264 bytes security) (deflated 29%)
  adding: R/methylKit.rdx (264 bytes security) (deflated 0%)
  adding: scripts/ (304 bytes security) (stored 0%)
  adding: scripts/create.data.R (264 bytes security) (deflated 69%)