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BioC 3.5: BUILD BIN report for SeqVarTools on tokay2

This page was generated on 2017-08-16 13:22:34 -0400 (Wed, 16 Aug 2017).

Package 1207/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SeqVarTools 1.14.0
Stephanie M. Gogarten
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/SeqVarTools
Last Changed Rev: 129126 / Revision: 131943
Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SeqVarTools
Version: 1.14.0
Command: cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.14.0.zip . & cd ../..
StartedAt: 2017-08-16 04:51:51 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 04:52:25 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 33.5 seconds
RetCode: 0
Status:  OK  
PackageFile: SeqVarTools_1.14.0.zip
PackageFileSize: 1.341 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   cd SeqVarTools.buildbin-libdir/SeqVarTools && zip -r ../../SeqVarTools_1.14.0.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: data/ (304 bytes security) (stored 0%)
  adding: data/Rdata.rdb (264 bytes security) (stored 0%)
  adding: data/Rdata.rds (264 bytes security) (stored 0%)
  adding: data/Rdata.rdx (264 bytes security) (stored 0%)
  adding: DESCRIPTION (264 bytes security) (deflated 43%)
  adding: doc/ (304 bytes security) (stored 0%)
  adding: doc/index.html (264 bytes security) (deflated 59%)
  adding: doc/SeqVarTools.pdf (264 bytes security) (deflated 23%)
  adding: doc/SeqVarTools.R (264 bytes security) (deflated 79%)
  adding: doc/SeqVarTools.Rnw (264 bytes security) (deflated 62%)
  adding: extdata/ (304 bytes security) (stored 0%)
  adding: extdata/gl_chr1.gds (264 bytes security) (deflated 56%)
  adding: extdata/gl_chr1.vcf (264 bytes security) (deflated 80%)
  adding: extdata/hapmap_annotation.txt (264 bytes security) (deflated 63%)
  adding: extdata/hapmap_annotation_DD.txt (264 bytes security) (deflated 40%)
  adding: extdata/hapmap_exome_chr22.gds (264 bytes security) (deflated 7%)
  adding: help/ (304 bytes security) (stored 0%)
  adding: help/aliases.rds (264 bytes security) (stored 0%)
  adding: help/AnIndex (264 bytes security) (deflated 81%)
  adding: help/paths.rds (264 bytes security) (stored 0%)
  adding: help/SeqVarTools.rdb (264 bytes security) (deflated 1%)
  adding: help/SeqVarTools.rdx (264 bytes security) (stored 0%)
  adding: html/ (304 bytes security) (stored 0%)
  adding: html/00Index.html (264 bytes security) (deflated 85%)
  adding: html/R.css (264 bytes security) (deflated 75%)
  adding: INDEX (264 bytes security) (deflated 57%)
  adding: MD5 (264 bytes security) (deflated 48%)
  adding: Meta/ (304 bytes security) (stored 0%)
  adding: Meta/data.rds (264 bytes security) (stored 0%)
  adding: Meta/features.rds (264 bytes security) (stored 0%)
  adding: Meta/hsearch.rds (264 bytes security) (stored 0%)
  adding: Meta/links.rds (264 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (264 bytes security) (stored 0%)
  adding: Meta/package.rds (264 bytes security) (stored 0%)
  adding: Meta/Rd.rds (264 bytes security) (stored 0%)
  adding: Meta/vignette.rds (264 bytes security) (stored 0%)
  adding: NAMESPACE (264 bytes security) (deflated 63%)
  adding: NEWS.Rd (264 bytes security) (deflated 68%)
  adding: R/ (304 bytes security) (stored 0%)
  adding: R/SeqVarTools (264 bytes security) (deflated 41%)
  adding: R/SeqVarTools.rdb (264 bytes security) (deflated 44%)
  adding: R/SeqVarTools.rdx (264 bytes security) (deflated 1%)
  adding: unitTests/ (304 bytes security) (stored 0%)
  adding: unitTests/test_alleleFrequency.R (264 bytes security) (deflated 60%)
  adding: unitTests/test_alleles.R (264 bytes security) (deflated 77%)
  adding: unitTests/test_alternateAlleleDetection.R (264 bytes security) (deflated 75%)
  adding: unitTests/test_applyMethod.R (264 bytes security) (deflated 81%)
  adding: unitTests/test_countSingletons.R (264 bytes security) (deflated 39%)
  adding: unitTests/test_duplicateDiscordance.R (264 bytes security) (deflated 82%)
  adding: unitTests/test_getData.R (264 bytes security) (deflated 81%)
  adding: unitTests/test_hethom.R (264 bytes security) (deflated 86%)
  adding: unitTests/test_hwe.R (264 bytes security) (deflated 63%)
  adding: unitTests/test_inbreedCoeff.R (264 bytes security) (deflated 61%)
  adding: unitTests/test_meanBySample.R (264 bytes security) (deflated 58%)
  adding: unitTests/test_mendelErr.R (264 bytes security) (deflated 81%)
  adding: unitTests/test_missingGenotypeRate.R (264 bytes security) (deflated 69%)
  adding: unitTests/test_pca.R (264 bytes security) (deflated 54%)
  adding: unitTests/test_refFrac.R (264 bytes security) (deflated 49%)
  adding: unitTests/test_regression.R (264 bytes security) (deflated 82%)
  adding: unitTests/test_SeqVarData.R (264 bytes security) (deflated 80%)
  adding: unitTests/test_setVariantID.R (264 bytes security) (deflated 60%)
  adding: unitTests/test_titv.R (264 bytes security) (deflated 71%)
  adding: unitTests/test_utils.R (264 bytes security) (deflated 77%)
  adding: unitTests/test_VariableLength.R (264 bytes security) (deflated 73%)