Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.5: CHECK report for Prize on tokay2

This page was generated on 2017-08-16 13:24:43 -0400 (Wed, 16 Aug 2017).

Package 1008/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Prize 1.6.0
Daryanaz Dargahi
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/Prize
Last Changed Rev: 129126 / Revision: 131943
Last Changed Date: 2017-04-24 15:25:24 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  OK [ OK ] OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Prize
Version: 1.6.0
Command: rm -rf Prize.buildbin-libdir Prize.Rcheck && mkdir Prize.buildbin-libdir Prize.Rcheck && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Prize.buildbin-libdir Prize_1.6.0.tar.gz >Prize.Rcheck\00install.out 2>&1 && cp Prize.Rcheck\00install.out Prize-install.out && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD check --library=Prize.buildbin-libdir --install="check:Prize-install.out" --force-multiarch --no-vignettes --timings Prize_1.6.0.tar.gz
StartedAt: 2017-08-16 02:02:25 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 02:05:04 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 159.0 seconds
RetCode: 0
Status:  OK  
CheckDir: Prize.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf Prize.buildbin-libdir Prize.Rcheck && mkdir Prize.buildbin-libdir Prize.Rcheck && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=Prize.buildbin-libdir Prize_1.6.0.tar.gz >Prize.Rcheck\00install.out 2>&1 && cp Prize.Rcheck\00install.out Prize-install.out  &&  C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD check --library=Prize.buildbin-libdir --install="check:Prize-install.out" --force-multiarch --no-vignettes --timings Prize_1.6.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'C:/Users/biocbuild/bbs-3.5-bioc/meat/Prize.Rcheck'
* using R version 3.4.1 (2017-06-30)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Prize/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'Prize' version '1.6.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'Prize' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
              user system elapsed
Prize-package 7.13      0    7.12
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
              user system elapsed
Prize-package 7.52      0    7.51
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'runTests.R'
 OK
** running tests for arch 'x64' ...
  Running 'runTests.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK

Prize.Rcheck/00install.out:


install for i386

* installing *source* package 'Prize' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'Prize' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Prize' as Prize_1.6.0.zip
* DONE (Prize)

Prize.Rcheck/examples_i386/Prize-Ex.timings:

nameusersystemelapsed
AIJ1.650.021.65
AIP1.090.001.10
CI1.390.041.44
GCR1.440.001.43
ICR2.430.002.44
IP2.770.002.77
Prize-package7.130.007.12
RM0.420.000.42
ahmatrix000
ahp0.290.000.30
ahp_matrix000
ahp_plot2.440.002.44
ahp_weights2.100.002.11
ahplot0.180.000.18
crplot0.220.000.22
dplot0.170.000.18
gaggregate3.110.003.10
pipeline1.970.001.97
rainbow_plot202
rainbowplot0.160.000.16
rating0.510.000.52
saaty_inconsistency2.610.002.60
simulation2.020.002.02
weight0.510.000.52
weight_plot2.360.002.36
wplot0.430.000.42

Prize.Rcheck/examples_x64/Prize-Ex.timings:

nameusersystemelapsed
AIJ2.190.002.19
AIP1.320.001.33
CI1.80.01.8
GCR1.890.001.89
ICR2.960.002.95
IP2.920.002.92
Prize-package7.520.007.51
RM0.390.000.39
ahmatrix000
ahp0.280.000.29
ahp_matrix000
ahp_plot2.520.002.51
ahp_weights2.260.002.27
ahplot0.20.00.2
crplot0.270.000.27
dplot0.190.000.18
gaggregate3.670.003.67
pipeline2.230.002.24
rainbow_plot2.250.002.25
rainbowplot0.200.000.21
rating0.600.000.59
saaty_inconsistency3.090.003.10
simulation3.090.003.09
weight0.790.000.78
weight_plot2.420.012.44
wplot0.470.020.48