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BioC 3.5: BUILD BIN report for FamAgg on veracruz2

This page was generated on 2017-08-16 13:33:50 -0400 (Wed, 16 Aug 2017).

Package 429/1382HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FamAgg 1.4.1
Johannes Rainer
Snapshot Date: 2017-08-15 17:17:57 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_5/madman/Rpacks/FamAgg
Last Changed Rev: 129217 / Revision: 131943
Last Changed Date: 2017-04-27 07:34:17 -0400 (Thu, 27 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  OK [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: FamAgg
Version: 1.4.1
Command: rm -rf FamAgg.buildbin-libdir && mkdir FamAgg.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FamAgg_1.4.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FamAgg.buildbin-libdir
StartedAt: 2017-08-16 10:09:41 -0400 (Wed, 16 Aug 2017)
EndedAt: 2017-08-16 10:10:05 -0400 (Wed, 16 Aug 2017)
EllapsedTime: 23.8 seconds
RetCode: 0
Status:  OK 
PackageFile: FamAgg_1.4.1.tgz
PackageFileSize: 2.433 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf FamAgg.buildbin-libdir && mkdir FamAgg.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FamAgg_1.4.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FamAgg.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=FamAgg.buildbin-libdir FamAgg_1.4.1.tar.gz'
>>>>>>> 

* installing *source* package ‘FamAgg’ ...
** R
** inst
** preparing package for lazy loading
Creating a new generic function for ‘pedigree’ in package ‘FamAgg’
in method for ‘countGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘countGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘estimateGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘estimateGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘generationsFrom’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘generationsFrom’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAncestors’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAncestors’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getChildren’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getChildren’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getCommonAncestor’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getCommonAncestor’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getMissingMate’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getMissingMate’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getSiblings’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getSiblings’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getAll’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAll’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getExternalMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getExternalMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getGenerationMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getGenerationMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getGenerationSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getGenerationSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (FamAgg)