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BioC 3.4: BUILD report for networkBMA on morelia

This page was generated on 2017-04-15 16:24:15 -0400 (Sat, 15 Apr 2017).

Package 841/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
networkBMA 2.12.0
Ka Yee Yeung
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/networkBMA
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: networkBMA
Version: 2.12.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data networkBMA
StartedAt: 2017-04-14 17:54:00 -0700 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 17:55:29 -0700 (Fri, 14 Apr 2017)
EllapsedTime: 88.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data networkBMA
###
##############################################################################
##############################################################################


* checking for file ‘networkBMA/DESCRIPTION’ ... OK
* preparing ‘networkBMA’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘networkBMA’ ...
** libs
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I./include -I. -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppArmadillo/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppEigen/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c MurmurHash3.cpp -o MurmurHash3.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I./include -I. -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppArmadillo/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppEigen/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -std=c++11 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I./include -I. -I/usr/local/include -I/usr/local/include/freetype2 -I/opt/X11/include -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppArmadillo/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/RcppEigen/include" -I"/Library/Frameworks/R.framework/Versions/3.3/Resources/library/BH/include"   -fPIC  -Wall -mtune=core2 -g -O2 -c ScanBMA_full.cpp -o ScanBMA_full.o
ScanBMA_full.cpp:16:10: fatal error: 'tr1/unordered_set' file not found
#include <tr1/unordered_set>
         ^
1 error generated.
make: *** [ScanBMA_full.o] Error 1
ERROR: compilation failed for package ‘networkBMA’
* removing ‘/private/tmp/RtmptNuCxW/Rinst1768a199a7740/networkBMA’
      -----------------------------------
ERROR: package installation failed