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BioC 3.4: BUILD report for flowCL on morelia

This page was generated on 2017-04-15 16:25:26 -0400 (Sat, 15 Apr 2017).

Package 426/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowCL 1.12.0
Justin Meskas
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/flowCL
Last Changed Rev: 122710 / Revision: 128728
Last Changed Date: 2016-10-17 14:45:06 -0400 (Mon, 17 Oct 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: flowCL
Version: 1.12.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowCL
StartedAt: 2017-04-14 18:51:15 -0700 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:55:47 -0700 (Fri, 14 Apr 2017)
EllapsedTime: 271.8 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowCL
###
##############################################################################
##############################################################################


* checking for file ‘flowCL/DESCRIPTION’ ... OK
* preparing ‘flowCL’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: Rgraphviz
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
    get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
    match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
    rbind, rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit, which, which.max, which.min

Loading required package: grid
Loading required package: SPARQL
Loading required package: XML

Attaching package: ‘XML’

The following object is masked from ‘package:graph’:

    addNode

Loading required package: RCurl
Loading required package: bitops

Error: processing vignette 'flowCL.Rnw' failed with diagnostics:
 chunk 3 (label = Date) 
Error in function (type, msg, asError = TRUE)  : 
  Failed to connect to 2001:4860:4802:32::15: No route to host
Execution halted