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BioC 3.4: INSTALL report for TCGAbiolinks on tokay1

This page was generated on 2017-04-15 16:20:14 -0400 (Sat, 15 Apr 2017).

Package 1229/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAbiolinks 2.2.10
Antonio Colaprico
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/TCGAbiolinks
Last Changed Rev: 127636 / Revision: 128728
Last Changed Date: 2017-03-22 18:20:19 -0400 (Wed, 22 Mar 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  TIMEOUT  OK 
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TCGAbiolinks
Version: 2.2.10
Command: rm -rf TCGAbiolinks.buildbin-libdir && mkdir TCGAbiolinks.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/TCGAbiolinks_2.2.10.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=TCGAbiolinks.buildbin-libdir --merge-multiarch TCGAbiolinks_2.2.10.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinks_2.2.10.zip && rm TCGAbiolinks_2.2.10.tar.gz TCGAbiolinks_2.2.10.zip
StartedAt: 2017-04-14 18:18:07 -0400 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 18:19:17 -0400 (Fri, 14 Apr 2017)
EllapsedTime: 69.1 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf TCGAbiolinks.buildbin-libdir && mkdir TCGAbiolinks.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.4/bioc/src/contrib/TCGAbiolinks_2.2.10.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL --build --library=TCGAbiolinks.buildbin-libdir --merge-multiarch TCGAbiolinks_2.2.10.tar.gz && C:\Users\biocbuild\bbs-3.4-bioc\R\bin\R.exe CMD INSTALL TCGAbiolinks_2.2.10.zip  && rm TCGAbiolinks_2.2.10.tar.gz TCGAbiolinks_2.2.10.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 67 17.8M   67 12.0M    0     0  49.3M      0 --:--:-- --:--:-- --:--:-- 49.4M
100 17.8M  100 17.8M    0     0  56.9M      0 --:--:-- --:--:-- --:--:-- 56.8M

install for i386

* installing *source* package 'TCGAbiolinks' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'TCGAbiolinks' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCGAbiolinks' as TCGAbiolinks_2.2.10.zip
* DONE (TCGAbiolinks)
* installing to library 'C:/Users/biocbuild/bbs-3.4-bioc/R/library'
package 'TCGAbiolinks' successfully unpacked and MD5 sums checked