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BioC 3.4: BUILD BIN report for GenomicFeatures on tokay1

This page was generated on 2017-04-15 16:16:01 -0400 (Sat, 15 Apr 2017).

Package 509/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicFeatures 1.26.4
Bioconductor Package Maintainer
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/GenomicFeatures
Last Changed Rev: 127839 / Revision: 128728
Last Changed Date: 2017-03-29 22:08:27 -0400 (Wed, 29 Mar 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GenomicFeatures
Version: 1.26.4
Command: cd GenomicFeatures.buildbin-libdir/GenomicFeatures && zip -r ../../GenomicFeatures_1.26.4.zip . & cd ../..
StartedAt: 2017-04-15 02:06:22 -0400 (Sat, 15 Apr 2017)
EndedAt: 2017-04-15 02:06:58 -0400 (Sat, 15 Apr 2017)
EllapsedTime: 36.0 seconds
RetCode: 0
Status:  OK  
PackageFile: GenomicFeatures_1.26.4.zip
PackageFileSize: 2.288 MiB

Command output

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###
### Running command:
###
###   cd GenomicFeatures.buildbin-libdir/GenomicFeatures && zip -r ../../GenomicFeatures_1.26.4.zip . & cd ../..
###
##############################################################################
##############################################################################


  adding: CITATION (284 bytes security) (deflated 56%)
  adding: DESCRIPTION (284 bytes security) (deflated 53%)
  adding: doc/ (324 bytes security) (stored 0%)
  adding: doc/GenomicFeatures.pdf (284 bytes security) (deflated 11%)
  adding: doc/GenomicFeatures.R (284 bytes security) (deflated 77%)
  adding: doc/GenomicFeatures.Rnw (284 bytes security) (deflated 65%)
  adding: doc/index.html (284 bytes security) (deflated 59%)
  adding: extdata/ (324 bytes security) (stored 0%)
  adding: extdata/Biomart_Ensembl_sample.sqlite (284 bytes security) (deflated 78%)
  adding: extdata/cD.exByEdge-SG-Vig.Rda (284 bytes security) (deflated 1%)
  adding: extdata/cD.exsByGenes-SG-Vig.Rda (284 bytes security) (deflated 2%)
  adding: extdata/events.Rda (284 bytes security) (stored 0%)
  adding: extdata/FeatureDb.sqlite (284 bytes security) (deflated 62%)
  adding: extdata/GFF3_files/ (324 bytes security) (stored 0%)
  adding: extdata/GFF3_files/a.gff3 (284 bytes security) (deflated 88%)
  adding: extdata/GFF3_files/a.sqlite (284 bytes security) (deflated 69%)
  adding: extdata/GFF3_files/dmel-1000-r5.11.filtered.gff (284 bytes security) (deflated 88%)
  adding: extdata/GFF3_files/dmel-1000-r5.11.filtered.sqlite (284 bytes security) (deflated 67%)
  adding: extdata/GFF3_files/NC_011025.gff (284 bytes security) (deflated 81%)
  adding: extdata/GFF3_files/TheCanonicalGene_v1.gff3 (284 bytes security) (deflated 81%)
  adding: extdata/GFF3_files/TheCanonicalGene_v2.gff3 (284 bytes security) (deflated 80%)
  adding: extdata/GTF_files/ (324 bytes security) (stored 0%)
  adding: extdata/GTF_files/Aedes_aegypti.partial.gtf (284 bytes security) (deflated 92%)
  adding: extdata/GTF_files/Aedes_aegypti.partial.sqlite (284 bytes security) (deflated 72%)
  adding: extdata/GTF_files/test1.gtf (284 bytes security) (deflated 80%)
  adding: extdata/hg19_knownGene_sample.rda (284 bytes security) (stored 0%)
  adding: extdata/hg19_knownGene_sample.sqlite (284 bytes security) (deflated 61%)
  adding: extdata/hg19_knownToLocusLink_sample.rda (284 bytes security) (stored 0%)
  adding: extdata/sample_ranges.rds (284 bytes security) (stored 0%)
  adding: help/ (324 bytes security) (stored 0%)
  adding: help/aliases.rds (284 bytes security) (stored 0%)
  adding: help/AnIndex (284 bytes security) (deflated 82%)
  adding: help/GenomicFeatures.rdb (284 bytes security) (deflated 1%)
  adding: help/GenomicFeatures.rdx (284 bytes security) (stored 0%)
  adding: help/paths.rds (284 bytes security) (stored 0%)
  adding: html/ (324 bytes security) (stored 0%)
  adding: html/00Index.html (284 bytes security) (deflated 87%)
  adding: html/R.css (284 bytes security) (deflated 75%)
  adding: INDEX (284 bytes security) (deflated 69%)
  adding: MD5 (284 bytes security) (deflated 50%)
  adding: Meta/ (324 bytes security) (stored 0%)
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  adding: Meta/links.rds (284 bytes security) (stored 0%)
  adding: Meta/nsInfo.rds (284 bytes security) (stored 0%)
  adding: Meta/package.rds (284 bytes security) (stored 0%)
  adding: Meta/Rd.rds (284 bytes security) (stored 0%)
  adding: Meta/vignette.rds (284 bytes security) (stored 0%)
  adding: NAMESPACE (284 bytes security) (deflated 68%)
  adding: NEWS (284 bytes security) (deflated 66%)
  adding: R/ (324 bytes security) (stored 0%)
  adding: R/GenomicFeatures (284 bytes security) (deflated 41%)
  adding: R/GenomicFeatures.rdb (284 bytes security) (deflated 25%)
  adding: R/GenomicFeatures.rdx (284 bytes security) (deflated 0%)
  adding: script/ (324 bytes security) (stored 0%)
  adding: script/maketRNAFDb.R (284 bytes security) (deflated 71%)
  adding: script/makeTxDbs.R (284 bytes security) (deflated 88%)
  adding: txdb-template/ (324 bytes security) (stored 0%)
  adding: txdb-template/DESCRIPTION (284 bytes security) (deflated 34%)
  adding: txdb-template/inst/ (324 bytes security) (stored 0%)
  adding: txdb-template/inst/extdata/ (324 bytes security) (stored 0%)
  adding: txdb-template/man/ (324 bytes security) (stored 0%)
  adding: txdb-template/man/package.Rd (284 bytes security) (deflated 47%)
  adding: txdb-template/NAMESPACE (284 bytes security) (deflated 21%)
  adding: txdb-template/R/ (324 bytes security) (stored 0%)
  adding: txdb-template/R/zzz.R (284 bytes security) (deflated 46%)
  adding: unitTests/ (324 bytes security) (stored 0%)
  adding: unitTests/test_coordinate-mapping-methods.R (284 bytes security) (deflated 83%)
  adding: unitTests/test_disjointExons.R (284 bytes security) (deflated 57%)
  adding: unitTests/test_getPromoterSeq-methods.R (284 bytes security) (deflated 73%)
  adding: unitTests/test_makeIdsForUniqueDataFrameRows.R (284 bytes security) (deflated 53%)
  adding: unitTests/test_makeTxDb.R (284 bytes security) (deflated 76%)
  adding: unitTests/test_makeTxDbFromBiomart.R (284 bytes security) (deflated 66%)
  adding: unitTests/test_makeTxDbFromGFF.R (284 bytes security) (deflated 67%)
  adding: unitTests/test_makeTxDbFromGRanges.R (284 bytes security) (deflated 84%)
  adding: unitTests/test_makeTxDbFromUCSC.R (284 bytes security) (deflated 74%)
  adding: unitTests/test_mapIdsToRanges.R (284 bytes security) (deflated 75%)
  adding: unitTests/test_select-methods.R (284 bytes security) (deflated 80%)
  adding: unitTests/test_transcripts.R (284 bytes security) (deflated 82%)
  adding: unitTests/test_transcriptsBy.R (284 bytes security) (deflated 81%)
  adding: unitTests/test_transcriptsByOverlaps.R (284 bytes security) (deflated 81%)
  adding: unitTests/test_TxDb_seqinfo.R (284 bytes security) (deflated 74%)