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BioC 3.4: BUILD report for GEOsearch on morelia

This page was generated on 2017-04-15 16:26:50 -0400 (Sat, 15 Apr 2017).

Package 522/1296HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GEOsearch 1.0.1
Zhicheng Ji
Snapshot Date: 2017-04-14 17:17:13 -0400 (Fri, 14 Apr 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_4/madman/Rpacks/GEOsearch
Last Changed Rev: 125438 / Revision: 128728
Last Changed Date: 2016-12-24 10:35:47 -0500 (Sat, 24 Dec 2016)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  ERROR  skipped 
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  ERROR  skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded [ ERROR ] skipped  skipped 

Summary

Package: GEOsearch
Version: 1.0.1
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GEOsearch
StartedAt: 2017-04-14 20:11:52 -0700 (Fri, 14 Apr 2017)
EndedAt: 2017-04-14 20:15:54 -0700 (Fri, 14 Apr 2017)
EllapsedTime: 242.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GEOsearch
###
##############################################################################
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* checking for file ‘GEOsearch/DESCRIPTION’ ... OK
* preparing ‘GEOsearch’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Quitting from lines 40-42 (GEOsearch.Rnw) 
Error: processing vignette 'GEOsearch.Rnw' failed with diagnostics:
failed to get URL after 3 tries:
  url: http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=gds&term=GSE%5BETYP%5D+oct3&retmax=1
  error: cannot open the connection
Execution halted