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This page was generated on 2024-05-31 17:03:00 -0400 (Fri, 31 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4753
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4464
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 951/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Heatplus 3.12.0  (landing page)
Alexander Ploner
Snapshot Date: 2024-05-30 18:28:32 -0400 (Thu, 30 May 2024)
git_url: https://git.bioconductor.org/packages/Heatplus
git_branch: RELEASE_3_19
git_last_commit: 8a9389c
git_last_commit_date: 2024-04-30 10:15:16 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

CHECK results for Heatplus on nebbiolo1


To the developers/maintainers of the Heatplus package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Heatplus.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: Heatplus
Version: 3.12.0
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:Heatplus.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings Heatplus_3.12.0.tar.gz
StartedAt: 2024-05-31 04:29:28 -0400 (Fri, 31 May 2024)
EndedAt: 2024-05-31 04:29:58 -0400 (Fri, 31 May 2024)
EllapsedTime: 30.1 seconds
RetCode: 0
Status:   OK  
CheckDir: Heatplus.Rcheck
Warnings: 0

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD check --install=check:Heatplus.install-out.txt --library=/home/biocbuild/bbs-3.19-bioc/R/site-library --timings Heatplus_3.12.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.19-bioc/meat/Heatplus.Rcheck’
* using R version 4.4.0 (2024-04-24)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
    GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘Heatplus/DESCRIPTION’ ... OK
* this is package ‘Heatplus’ version ‘3.12.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘Heatplus’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Unexported object imported by a ':::' call: ‘stats:::plotNode’
  See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.19-bioc/meat/Heatplus.Rcheck/00check.log’
for details.


Installation output

Heatplus.Rcheck/00install.out

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###
### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL Heatplus
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘Heatplus’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Heatplus)

Tests output


Example timings

Heatplus.Rcheck/Heatplus-Ex.timings

nameusersystemelapsed
BrewerClusterCol0.0410.0150.057
RGBColVec0.0010.0000.000
annHeatmap0.6810.0350.717
annHeatmap20.1140.0070.122
breakColors0.0050.0000.005
convAnnData0.0240.0070.032
doLegend0.0010.0010.001
g2r.colors0.0030.0000.003
heatmapLayout0.0020.0000.002
heatmap_20.0010.0000.001
heatmap_plus0.0010.0000.001
modifyExistingList0.0000.0010.002
niceBreaks0.0000.0010.001
oldCutplot.dendrogram000
oldPicketplot0.0000.0010.001
picketPlot0.1010.0040.104
plot.annHeatmap0.1240.0000.124
print.annHeatmap0.0090.0000.010
regHeatmap0.0190.0000.019