Back to Multiple platform build/check report for BioC 3.19: simplified long |
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This page was generated on 2024-05-30 11:35:33 -0400 (Thu, 30 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4753 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4518 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 640/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
EGSEA 1.32.0 (landing page) Monther Alhamdoosh
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the EGSEA package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EGSEA.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: EGSEA |
Version: 1.32.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EGSEA |
StartedAt: 2024-05-29 16:41:41 -0400 (Wed, 29 May 2024) |
EndedAt: 2024-05-29 16:46:15 -0400 (Wed, 29 May 2024) |
EllapsedTime: 274.0 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data EGSEA ### ############################################################################## ############################################################################## * checking for file ‘EGSEA/DESCRIPTION’ ... OK * preparing ‘EGSEA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘EGSEA.Rnw’ using knitr 2024-05-29 16:45:58.216 R[48670:1965544460] XType: com.apple.fonts is not accessible. 2024-05-29 16:45:58.216 R[48670:1965544460] XType: XTFontStaticRegistry is enabled. Error: processing vignette 'EGSEA.Rnw' failed with diagnostics: Running 'texi2dvi' on 'EGSEA.tex' failed. LaTeX errors: ! Package xcolor Error: Undefined color `fgcolor'. See the xcolor package documentation for explanation. Type H <return> for immediate help. ... ! Emergency stop. ... l.186 ...{rgb}{0.941, 0.941, 0.941}\color{fgcolor} \begin{kframe} ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘EGSEA.Rnw’ SUMMARY: processing the following file failed: ‘EGSEA.Rnw’ Error: Vignette re-building failed. Execution halted