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This page was generated on 2024-04-18 11:32:08 -0400 (Thu, 18 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson1macOS 13.6.1 Venturaarm644.3.3 (2024-02-29) -- "Angel Food Cake" 4388
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 346/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chromVAR 1.24.0  (landing page)
Alicia Schep
Snapshot Date: 2024-04-16 09:00:03 -0400 (Tue, 16 Apr 2024)
git_url: https://git.bioconductor.org/packages/chromVAR
git_branch: RELEASE_3_18
git_last_commit: e2d61b0
git_last_commit_date: 2023-10-24 11:00:14 -0400 (Tue, 24 Oct 2023)
kjohnson1macOS 13.6.1 Ventura / arm64  OK    OK    OK    OK  NO, package depends on 'TFBSTools' which is only available as a source package that needs compilation

BUILD results for chromVAR on kjohnson1


To the developers/maintainers of the chromVAR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: chromVAR
Version: 1.24.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data chromVAR
StartedAt: 2024-04-16 15:23:02 -0400 (Tue, 16 Apr 2024)
EndedAt: 2024-04-16 15:26:19 -0400 (Tue, 16 Apr 2024)
EllapsedTime: 197.9 seconds
RetCode: 0
Status:   OK  
PackageFile: chromVAR_1.24.0.tar.gz
PackageFileSize: 505 KiB

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data chromVAR
###
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* checking for file ‘chromVAR/DESCRIPTION’ ... OK
* preparing ‘chromVAR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘chromVAR/data/example_counts.rda’ ‘chromVAR/data/mini_counts.rda’
    ‘chromVAR/data/mini_dev.rda’ ‘chromVAR/data/mini_ix.rda’
* building ‘chromVAR_1.24.0.tar.gz’