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This page was generated on 2023-04-12 10:55:42 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_644.3.0 alpha (2023-04-03 r84154) 4547
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_64R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences" 4333
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for spatzie on nebbiolo2


To the developers/maintainers of the spatzie package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/spatzie.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1957/2207HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
spatzie 1.5.0  (landing page)
Jennifer Hammelman
Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)
git_url: https://git.bioconductor.org/packages/spatzie
git_branch: devel
git_last_commit: e8d94fb
git_last_commit_date: 2022-11-01 11:25:25 -0400 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  ERROR    ERROR  skipped
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped

Summary

Package: spatzie
Version: 1.5.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data spatzie
StartedAt: 2023-04-12 04:15:58 -0400 (Wed, 12 Apr 2023)
EndedAt: 2023-04-12 04:16:10 -0400 (Wed, 12 Apr 2023)
EllapsedTime: 12.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data spatzie
###
##############################################################################
##############################################################################


* checking for file ‘spatzie/DESCRIPTION’ ... OK
* preparing ‘spatzie’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘spatzie’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘colMeans’ is not exported by 'namespace:BiocGenerics'
Execution halted
ERROR: lazy loading failed for package ‘spatzie’
* removing ‘/tmp/Rtmp4hrGKn/Rinstbdbfd78afb254/spatzie’
      -----------------------------------
ERROR: package installation failed