Multiple platform build/check report for BioC 3.17 - INSTALL results for Organism.dplyr on nebbiolo1

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This page was generated on 2023-04-12 10:55:28 -0400 (Wed, 12 Apr 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.1 LTS)	x86_64	4.3.0 alpha (2023-04-03 r84154)	4547
nebbiolo2	Linux (Ubuntu 20.04.5 LTS)	x86_64	R Under development (unstable) (2023-02-14 r83833) -- "Unsuffered Consequences"	4333
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for Organism.dplyr on nebbiolo1

To the developers/maintainers of the Organism.dplyr package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Organism.dplyr.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Organism.dplyr 1.27.2 (landing page)
Martin Morgan

Snapshot Date: 2023-04-11 14:00:16 -0400 (Tue, 11 Apr 2023)

git_url: https://git.bioconductor.org/packages/Organism.dplyr

git_branch: devel

git_last_commit: 4b09dd2

git_last_commit_date: 2023-03-27 16:58:32 -0400 (Mon, 27 Mar 2023)

nebbiolo1

Linux (Ubuntu 22.04.1 LTS) / x86_64

ERROR

nebbiolo2

Linux (Ubuntu 20.04.5 LTS) / x86_64

Summary

Package: Organism.dplyr

Version: 1.27.2

Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Organism.dplyr

StartedAt: 2023-04-11 15:18:57 -0400 (Tue, 11 Apr 2023)

EndedAt: 2023-04-11 15:19:33 -0400 (Tue, 11 Apr 2023)

EllapsedTime: 36.5 seconds

RetCode: 0

Status: OK

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL Organism.dplyr
###
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’
* installing *source* package ‘Organism.dplyr’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Organism.dplyr)