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This page was generated on 2023-01-02 09:00:37 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for MatrixRider on palomino5


To the developers/maintainers of the MatrixRider package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1089/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MatrixRider 1.31.0  (landing page)
Elena Grassi
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/MatrixRider
git_branch: master
git_last_commit: 7c2b20a
git_last_commit_date: 2022-11-01 11:11:16 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  

Summary

Package: MatrixRider
Version: 1.31.0
Command: rm -rf MatrixRider.buildbin-libdir && mkdir MatrixRider.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=MatrixRider.buildbin-libdir MatrixRider_1.31.0.tar.gz
StartedAt: 2022-12-29 05:21:01 -0500 (Thu, 29 Dec 2022)
EndedAt: 2022-12-29 05:21:52 -0500 (Thu, 29 Dec 2022)
EllapsedTime: 50.9 seconds
RetCode: 0
Status:   OK  
PackageFile: MatrixRider_1.31.0.zip
PackageFileSize: 289.1 KiB

Command output

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### Running command:
###
###   rm -rf MatrixRider.buildbin-libdir && mkdir MatrixRider.buildbin-libdir && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD INSTALL --build --library=MatrixRider.buildbin-libdir MatrixRider_1.31.0.tar.gz
###
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* installing *source* package 'MatrixRider' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c Biostring_stubs.c -o Biostring_stubs.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c CuTest.c -o CuTest.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c R_init_MatrixRider.c -o R_init_MatrixRider.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c RunCuTest.c -o RunCuTest.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c XVector_stubs.c -o XVector_stubs.o
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.17-bioc/R/library/IRanges/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/XVector/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/Biostrings/include' -I'F:/biocbuild/bbs-3.17-bioc/R/library/S4Vectors/include'   -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c matrix_rider.c -o matrix_rider.o
gcc -shared -s -static-libgcc -o MatrixRider.dll tmp.def Biostring_stubs.o CuTest.o R_init_MatrixRider.o RunCuTest.o XVector_stubs.o matrix_rider.o -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -Lc:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.17-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.17-bioc-rtools43/meat/MatrixRider.buildbin-libdir/00LOCK-MatrixRider/00new/MatrixRider/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MatrixRider' as MatrixRider_1.31.0.zip
* DONE (MatrixRider)