Back to Workflows build report for BioC 3.15

This page was generated on 2022-10-18 14:00:09 -0400 (Tue, 18 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ExpressionNormalizationWorkflow on merida1


To the developers/maintainers of the ExpressionNormalizationWorkflow package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 11/29HostnameOS / ArchINSTALLBUILD
ExpressionNormalizationWorkflow 1.22.0  (landing page)
Karthikeyan Murugesan
Snapshot Date: 2022-10-18 07:45:02 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/ExpressionNormalizationWorkflow
git_branch: RELEASE_3_15
git_last_commit: 464e305
git_last_commit_date: 2022-04-26 12:40:28 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK  

Summary

Package: ExpressionNormalizationWorkflow
Version: 1.22.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ExpressionNormalizationWorkflow
StartedAt: 2022-10-18 08:00:59 -0400 (Tue, 18 Oct 2022)
EndedAt: 2022-10-18 08:01:26 -0400 (Tue, 18 Oct 2022)
EllapsedTime: 26.3 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ExpressionNormalizationWorkflow
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘ExpressionNormalizationWorkflow’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** help
Warning: ExpressionNormalizationWorkflow-package.Rd:29: All text must be in a section
Warning: ExpressionNormalizationWorkflow-package.Rd:30: All text must be in a section
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** testing if installed package keeps a record of temporary installation path
* DONE (ExpressionNormalizationWorkflow)