Alejandro Reyes
| Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022) |
| git_url: https://git.bioconductor.org/packages/DEXSeq |
| git_branch: RELEASE_3_15 |
| git_last_commit: d91de62 |
| git_last_commit_date: 2022-04-26 11:08:07 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-10-19 13:22:50 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the DEXSeq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DEXSeq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 520/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| DEXSeq 1.42.0 (landing page) Alejandro Reyes
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: DEXSeq |
| Version: 1.42.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DEXSeq |
| StartedAt: 2022-10-18 18:07:05 -0400 (Tue, 18 Oct 2022) |
| EndedAt: 2022-10-18 18:09:30 -0400 (Tue, 18 Oct 2022) |
| EllapsedTime: 144.8 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: DEXSeq_1.42.0.tar.gz |
| PackageFileSize: 5.988 MiB |
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###
### Running command:
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### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data DEXSeq
###
##############################################################################
##############################################################################
* checking for file ‘DEXSeq/DESCRIPTION’ ... OK
* preparing ‘DEXSeq’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
NB: this package now depends on R (>= 3.5.0)
WARNING: Added dependency on R >= 3.5.0 because serialized objects in
serialize/load version 3 cannot be read in older versions of R.
File(s) containing such objects:
‘DEXSeq/vignettes/DEXSeq_cache/html/DEXSeqHTML_b45006eaf421c54effed4b219c9c7922.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/DEXSeqHTML_b45006eaf421c54effed4b219c9c7922.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/MvsA_f29c6bda0122efd15e1fcb792017bdf1.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/MvsA_f29c6bda0122efd15e1fcb792017bdf1.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/acc_92bffe063cb4f2d367bf710d22b4884f.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/acc_92bffe063cb4f2d367bf710d22b4884f.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/alldeu_7a887a95194a5afe48e933c7bde68f0e.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/alldeu_7a887a95194a5afe48e933c7bde68f0e.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet2FindBAMs2_4b49fbfbdb6be189c81e955b20383f0c.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet2FindBAMs2_4b49fbfbdb6be189c81e955b20383f0c.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet2FindBAMs_4d024eb60ca186032a9844006547324f.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet2FindBAMs_4d024eb60ca186032a9844006547324f.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet3_d427e08a27fc8a94fcf8d27c59c34ab8.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet3_d427e08a27fc8a94fcf8d27c59c34ab8.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDisjoin_b7f26b03b3fb7afa13bed97f813d96fd.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDisjoin_b7f26b03b3fb7afa13bed97f813d96fd.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDownloadAnno_b75367c7fe90529cfb51eb7230691ce2.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDownloadAnno_b75367c7fe90529cfb51eb7230691ce2.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetLoadPacks_e75cec772d349fb01a5774ca86e33e36.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetLoadPacks_e75cec772d349fb01a5774ca86e33e36.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/checkClaim_0a27f3be0dca03130f3a4dc02e537196.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/checkClaim_0a27f3be0dca03130f3a4dc02e537196.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/check_2411f40823cf472106c5a4722bf62de7.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/check_2411f40823cf472106c5a4722bf62de7.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/design_97bf9abef1eccd05450973a5d2b44f2f.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/design_97bf9abef1eccd05450973a5d2b44f2f.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/estDisps_again_ba5fee3c6a54093fe91132c12b2c6b96.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/estDisps_again_ba5fee3c6a54093fe91132c12b2c6b96.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/estFC_0c45311bfbc42568a89efaf1031f17a9.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/estFC_0c45311bfbc42568a89efaf1031f17a9.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/fitdiagnostics_611937bf02b80093f638803c9c7edd75.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/fitdiagnostics_611937bf02b80093f638803c9c7edd75.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/formulas2_66591c3deb9e0bf1d7e6c77e22d94a96.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/formulas2_66591c3deb9e0bf1d7e6c77e22d94a96.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/grmethods_b07569e73227f189623cc5c9b8fa7c4b.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/grmethods_b07569e73227f189623cc5c9b8fa7c4b.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/loadDEXSeq_d9b8ca213eb310560cfcdede734eb527.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/loadDEXSeq_d9b8ca213eb310560cfcdede734eb527.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/para1_89dbb3ade805e28cc906422fb7166a88.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/para1_89dbb3ade805e28cc906422fb7166a88.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/pergeneqval_79f551a2adfcf5f78eac947e884dd43b.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/pergeneqval_79f551a2adfcf5f78eac947e884dd43b.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot1_3963d560a8bd84f6cdca9b188a81521d.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot1_3963d560a8bd84f6cdca9b188a81521d.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot2_5f19666340ed333a3667bb2e721a9876.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot2_5f19666340ed333a3667bb2e721a9876.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot3_2e90406bcba9aa097d22fa5ef36417d2.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot3_2e90406bcba9aa097d22fa5ef36417d2.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot4_eb6c5fde25d8949f4615b24bbe49297e.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/plot4_eb6c5fde25d8949f4615b24bbe49297e.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/res_again_c2cff9fe118e282b648e531fde4aa71d.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/res_again_c2cff9fe118e282b648e531fde4aa71d.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/results1_2eb20f72babee7f70b2e78b43480b26b.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/results1_2eb20f72babee7f70b2e78b43480b26b.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/results2_812d1d26d7add4c0c4b001fa003eaa89.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/results2_812d1d26d7add4c0c4b001fa003eaa89.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/sampleTable_58dfdf396491ffa550c8bb17328c3b95.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/sampleTable_58dfdf396491ffa550c8bb17328c3b95.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/sessionInfo_6c29e58c2b3e78a369815a7ecc6f9a86.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/sessionInfo_6c29e58c2b3e78a369815a7ecc6f9a86.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/startVignette_06602cd683e55cb42c4fa1de2fb44cd9.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/startVignette_06602cd683e55cb42c4fa1de2fb44cd9.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/systemFile_7d82a3081b671b0f9f4241a382b57fd1.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/systemFile_7d82a3081b671b0f9f4241a382b57fd1.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/table2_b1ec9ee4b4ba4fe7f6d497fd05428098.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/table2_b1ec9ee4b4ba4fe7f6d497fd05428098.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/table3_699eaf049060db5f0031482fd6dbb956.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/table3_699eaf049060db5f0031482fd6dbb956.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/tallyExons_96a9f8ffb7ae0725e325018a148696bc.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/tallyExons_96a9f8ffb7ae0725e325018a148696bc.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/tallyGenes_f48208b80a9b3c703e1dbaa4406cf4c4.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/tallyGenes_f48208b80a9b3c703e1dbaa4406cf4c4.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/testForDEU1_1a3efeda2856e145a017116503a174af.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/testForDEU1_1a3efeda2856e145a017116503a174af.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/test_again_fb8694766ac129f7bc3515c860594c55.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/test_again_fb8694766ac129f7bc3515c860594c55.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-10_a990fa7cec90d174b59ce953917110b8.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-10_a990fa7cec90d174b59ce953917110b8.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-2_55afdb1888a0c1bff60a9e1794a17073.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-2_55afdb1888a0c1bff60a9e1794a17073.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-3_3b82d970fd3854b492b1bce5b1ba1d36.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-3_3b82d970fd3854b492b1bce5b1ba1d36.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-4_aeb83c63769772345f14e8ab23053e81.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-4_aeb83c63769772345f14e8ab23053e81.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-5_13fce165bd81b87167998920fa3cd0ee.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-5_13fce165bd81b87167998920fa3cd0ee.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-6_0edcdf4cb3f42395aa647bc3ee0634eb.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-6_0edcdf4cb3f42395aa647bc3ee0634eb.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-7_4a27237e897622a911e59946cec643de.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-7_4a27237e897622a911e59946cec643de.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-8_6b1fb64f885bae0c12575fa0279d1262.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-8_6b1fb64f885bae0c12575fa0279d1262.rdx’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-9_6402346465b5cffe67d775cbcbe3bb4c.RData’
‘DEXSeq/vignettes/DEXSeq_cache/html/unnamed-chunk-9_6402346465b5cffe67d775cbcbe3bb4c.rdx’
* building ‘DEXSeq_1.42.0.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, :
storing paths of more than 100 bytes is not portable:
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSet2FindBAMs2_4b49fbfbdb6be189c81e955b20383f0c.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, :
storing paths of more than 100 bytes is not portable:
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDownloadAnno_b75367c7fe90529cfb51eb7230691ce2.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, :
storing paths of more than 100 bytes is not portable:
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDownloadAnno_b75367c7fe90529cfb51eb7230691ce2.rdb’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, :
storing paths of more than 100 bytes is not portable:
‘DEXSeq/vignettes/DEXSeq_cache/html/buildExonCountSetDownloadAnno_b75367c7fe90529cfb51eb7230691ce2.rdx’