Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2021-10-15 15:06:23 -0400 (Fri, 15 Oct 2021).

INSTALL results for sojourner on tokay2

To the developers/maintainers of the sojourner package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sojourner.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1805/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sojourner 1.6.0  (landing page)
Sojourner Developer
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/sojourner
git_branch: RELEASE_3_13
git_last_commit: 2ea1727
git_last_commit_date: 2021-05-19 12:45:38 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: sojourner
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/sojourner_1.6.0.tar.gz && rm -rf sojourner.buildbin-libdir && mkdir sojourner.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sojourner.buildbin-libdir sojourner_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL sojourner_1.6.0.zip && rm sojourner_1.6.0.tar.gz sojourner_1.6.0.zip
StartedAt: 2021-10-14 11:10:02 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 11:14:29 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 266.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/sojourner_1.6.0.tar.gz && rm -rf sojourner.buildbin-libdir && mkdir sojourner.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sojourner.buildbin-libdir sojourner_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL sojourner_1.6.0.zip && rm sojourner_1.6.0.tar.gz sojourner_1.6.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 12.8M    0 44574    0     0   281k      0  0:00:46 --:--:--  0:00:46  282k
 21 12.8M   21 2814k    0     0  2478k      0  0:00:05  0:00:01  0:00:04 2477k
 49 12.8M   49 6573k    0     0  3084k      0  0:00:04  0:00:02  0:00:02 3084k
 87 12.8M   87 11.2M    0     0  3676k      0  0:00:03  0:00:03 --:--:-- 3676k
 95 12.8M   95 12.2M    0     0  3043k      0  0:00:04  0:00:04 --:--:-- 3043k
 95 12.8M   95 12.3M    0     0  2454k      0  0:00:05  0:00:05 --:--:-- 2521k
 96 12.8M   96 12.4M    0     0  2074k      0  0:00:06  0:00:06 --:--:-- 1982k
100 12.8M  100 12.8M    0     0  2131k      0  0:00:06  0:00:06 --:--:-- 1631k

install for i386

* installing *source* package 'sojourner' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: multiple methods tables found for 'area'
** help
*** installing help indices
  converting help for package 'sojourner'
    finding HTML links ... done
    Dcoef-methods                           html  
    combineTrackll-methods                  html  
    compareFolder-methods                   html  
    compare_RT_CDF-methods                  html  
    createTrackll-methods                   html  
    dispVariance-methods                    html  
    displacementCDF-methods                 html  
    dwellTime-methods                       html  
    exportTrackll-methods                   html  
    filterTrack-methods                     html  
    fitNormDistr-methods                    html  
    fitRT-methods                           html  
    linkSkippedFrames-methods               html  
    maskTracks-methods                      html  
    mergeTracks-methods                     html  
    msd-methods                             html  
    plotIndividual_Tracks-methods           html  
    plotLocalizations_Density-methods       html  
    plotTrack-methods                       html  
    plotTrackOverlay_Dcoef-methods          html  
    sojourner                               html  
    sojournerGUI-methods                    html  
    squareDisp-methods                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for 'area'
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for 'area'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sojourner' ...
** testing if installed package can be loaded
Warning: multiple methods tables found for 'area'
* MD5 sums
packaged installation of 'sojourner' as sojourner_1.6.0.zip
* DONE (sojourner)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'sojourner' successfully unpacked and MD5 sums checked