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This page was generated on 2021-10-15 15:06:51 -0400 (Fri, 15 Oct 2021).

BUILD results for samExploreR on machv2

To the developers/maintainers of the samExploreR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/samExploreR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1665/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
samExploreR 1.16.0  (landing page)
shailesh tripathi
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/samExploreR
git_branch: RELEASE_3_13
git_last_commit: 31dea3d
git_last_commit_date: 2021-05-19 12:25:04 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64... NOT SUPPORTED ...
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: samExploreR
Version: 1.16.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data samExploreR
StartedAt: 2021-10-14 14:36:05 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 14:36:28 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 23.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data samExploreR
###
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* checking for file ‘samExploreR/DESCRIPTION’ ... OK
* preparing ‘samExploreR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Manual.Rnw’ using Sweave
Loading required package: ggplot2
Loading required package: Rsubread
Loading required package: RNAseqData.HNRNPC.bam.chr14
Loading required package: edgeR
Loading required package: limma
Warning: Package 'samExploreR' is deprecated and will be removed from
  Bioconductor version 3.14
Simulated Depth: 80%
Number of sub samples: 1

Error: processing vignette 'Manual.Rnw' failed with diagnostics:
 chunk 5 (label = Run-samExplore) 
Error in .stop_quietly() : 

--- failed re-building ‘Manual.Rnw’

SUMMARY: processing the following file failed:
  ‘Manual.Rnw’

Error: Vignette re-building failed.
Execution halted