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This page was generated on 2021-10-15 15:05:51 -0400 (Fri, 15 Oct 2021).

INSTALL results for rqubic on nebbiolo1

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rqubic.git to
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raw results

Package 1630/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rqubic 1.38.0  (landing page)
Jitao David Zhang
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/rqubic
git_branch: RELEASE_3_13
git_last_commit: 8d90216
git_last_commit_date: 2021-05-19 11:49:32 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: rqubic
Version: 1.38.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL rqubic
StartedAt: 2021-10-14 06:19:39 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 06:19:47 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 7.7 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL rqubic
###
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* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘rqubic’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c bicluster.c -o bicluster.o
bicluster.c: In function ‘seed_intersect_r’:
bicluster.c:354:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  354 |       if (flag=ss) (*m_cnt)++;
      |           ^~~~
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c discretize.c -o discretize.o
In file included from discretize.c:9:
rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable]
   62 | static const char *MINCOL_ATT_NAME="minimumCol";
      |                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable]
   61 | static const char *EDGELIST_ATT_NAME="edgelist";
      |                    ^~~~~~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c fib.c -o fib.o
In file included from fib.c:35:
rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable]
   62 | static const char *MINCOL_ATT_NAME="minimumCol";
      |                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable]
   61 | static const char *EDGELIST_ATT_NAME="edgelist";
      |                    ^~~~~~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c graph.c -o graph.o
gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c rqubic.c -o rqubic.o
In file included from rqubic.c:5:
rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable]
   62 | static const char *MINCOL_ATT_NAME="minimumCol";
      |                    ^~~~~~~~~~~~~~~
rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable]
   61 | static const char *EDGELIST_ATT_NAME="edgelist";
      |                    ^~~~~~~~~~~~~~~~~
gcc -shared -L/home/biocbuild/bbs-3.13-bioc/R/lib -L/usr/local/lib -o rqubic.so bicluster.o discretize.o fib.o graph.o rqubic.o -L/home/biocbuild/bbs-3.13-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.13-bioc/R/library/00LOCK-rqubic/00new/rqubic/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rqubic)