David Zhang
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/megadepth |
| git_branch: RELEASE_3_13 |
| git_last_commit: 844d5f2 |
| git_last_commit_date: 2021-08-23 17:23:15 -0400 (Mon, 23 Aug 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:10 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the megadepth package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/megadepth.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1066/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| megadepth 1.2.3 (landing page) David Zhang
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: megadepth |
| Version: 1.2.3 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/megadepth_1.2.3.tar.gz && rm -rf megadepth.buildbin-libdir && mkdir megadepth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=megadepth.buildbin-libdir megadepth_1.2.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL megadepth_1.2.3.zip && rm megadepth_1.2.3.tar.gz megadepth_1.2.3.zip |
| StartedAt: 2021-10-14 09:47:12 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:48:08 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 55.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/megadepth_1.2.3.tar.gz && rm -rf megadepth.buildbin-libdir && mkdir megadepth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=megadepth.buildbin-libdir megadepth_1.2.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL megadepth_1.2.3.zip && rm megadepth_1.2.3.tar.gz megadepth_1.2.3.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
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install for i386
* installing *source* package 'megadepth' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'megadepth'
finding HTML links ... done
bam_to_bigwig html
bam_to_junctions html
get_coverage html
install_megadepth html
megadepth_cmd html
process_junction_table html
read_coverage html
read_junction_table html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'megadepth' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'megadepth' as megadepth_1.2.3.zip
* DONE (megadepth)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'megadepth' successfully unpacked and MD5 sums checked