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This page was generated on 2021-10-15 15:06:49 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for ReactomeGSA on machv2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReactomeGSA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1534/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReactomeGSA 1.6.1  (landing page)
Johannes Griss
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/ReactomeGSA
git_branch: RELEASE_3_13
git_last_commit: 0fa14a1
git_last_commit_date: 2021-09-10 02:35:40 -0400 (Fri, 10 Sep 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ReactomeGSA
Version: 1.6.1
Command: rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ReactomeGSA_1.6.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ReactomeGSA.buildbin-libdir
StartedAt: 2021-10-15 03:40:52 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 03:42:01 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 69.8 seconds
RetCode: 0
Status:   OK  
PackageFile: ReactomeGSA_1.6.1.tgz
PackageFileSize: 486.6 KiB

Command output

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### Running command:
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###   rm -rf ReactomeGSA.buildbin-libdir && mkdir ReactomeGSA.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ReactomeGSA_1.6.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ReactomeGSA.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ReactomeGSA.buildbin-libdir ReactomeGSA_1.6.1.tar.gz'
>>>>>>> 

* installing *source* package ‘ReactomeGSA’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
in method for ‘analyse_sc_clusters’ with signature ‘object="Seurat"’: no definition for class “Seurat”
in method for ‘analyse_sc_clusters’ with signature ‘object="SingleCellExperiment"’: no definition for class “SingleCellExperiment”
in method for ‘add_dataset’ with signature ‘request="ReactomeAnalysisRequest",expression_values="EList"’: no definition for class “EList”
in method for ‘add_dataset’ with signature ‘request="ReactomeAnalysisRequest",expression_values="DGEList"’: no definition for class “DGEList”
in method for ‘add_dataset’ with signature ‘request="ReactomeAnalysisRequest",expression_values="ExpressionSet"’: no definition for class “ExpressionSet”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ReactomeGSA)