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This page was generated on 2021-10-15 15:06:43 -0400 (Fri, 15 Oct 2021).

INSTALL results for MinimumDistance on machv2

To the developers/maintainers of the MinimumDistance package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MinimumDistance.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1141/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MinimumDistance 1.36.0  (landing page)
Robert Scharpf
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/MinimumDistance
git_branch: RELEASE_3_13
git_last_commit: 9e0f7b9
git_last_commit_date: 2021-05-19 11:52:19 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: MinimumDistance
Version: 1.36.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL MinimumDistance
StartedAt: 2021-10-14 10:08:08 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 10:09:07 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 59.0 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL MinimumDistance
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1/Resources/library’
* installing *source* package ‘MinimumDistance’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
Creating a new generic function for ‘allNames’ in package ‘MinimumDistance’
in method for ‘coerce’ with signature ‘"RangedDataCNV","GRanges"’: no definition for class “RangedDataCNV”
in method for ‘todf’ with signature ‘object="TrioSet",rangeData="RangedData"’: no definition for class “RangedData”
in method for ‘prune’ with signature ‘object="TrioSet",ranges="RangedDataCNV"’: no definition for class “RangedDataCNV”
in method for ‘prune’ with signature ‘object="TrioSetList",ranges="RangedDataCNV"’: no definition for class “RangedDataCNV”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
** testing if installed package can be loaded from final location
No methods found in package ‘oligoClasses’ for request: ‘mean’ when loading ‘crlmm’
Warning: replacing previous import ‘ff::pattern’ by ‘grid::pattern’ when loading ‘MinimumDistance’
** testing if installed package keeps a record of temporary installation path
* DONE (MinimumDistance)