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This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for GenomicDataCommons on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenomicDataCommons.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 740/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomicDataCommons 1.16.0  (landing page)
Sean Davis
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/GenomicDataCommons
git_branch: RELEASE_3_13
git_last_commit: d614d6e
git_last_commit_date: 2021-05-19 12:27:00 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: GenomicDataCommons
Version: 1.16.0
Command: rm -rf GenomicDataCommons.buildbin-libdir && mkdir GenomicDataCommons.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicDataCommons.buildbin-libdir GenomicDataCommons_1.16.0.tar.gz
StartedAt: 2021-10-15 09:32:44 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 09:34:19 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 94.8 seconds
RetCode: 0
Status:   OK  
PackageFile: GenomicDataCommons_1.16.0.zip
PackageFileSize: 1.091 MiB

Command output

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###
### Running command:
###
###   rm -rf GenomicDataCommons.buildbin-libdir && mkdir GenomicDataCommons.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicDataCommons.buildbin-libdir GenomicDataCommons_1.16.0.tar.gz
###
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install for i386

* installing *source* package 'GenomicDataCommons' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomicDataCommons'
    finding HTML links ... done
    GenomicDataCommons                      html  
    aggregations                            html  
    available_expand                        html  
    available_fields                        html  
    available_values                        html  
    constants                               html  
    count                                   html  
    default_fields                          html  
    dot-htseq_importer                      html  
    entity_name                             html  
    expand                                  html  
    faceting                                html  
    field_description                       html  
    filtering                               html  
    gdc_cache                               html  
    gdc_client                              html  
    gdc_clinical                            html  
    gdc_rnaseq                              html  
    gdc_token                               html  
    gdcdata                                 html  
    grep_fields                             html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.13-bioc/tmpdir/RtmpWwG5ib/R.INSTALL551c1b0a646/GenomicDataCommons/man/grep_fields.Rd:10: missing link '.gdc_entities'
    id_field                                html  
    ids                                     html  
    make_filter                             html  
    manifest                                html  
    mapping                                 html  
    query                                   html  
Rd warning: C:/Users/biocbuild/bbs-3.13-bioc/tmpdir/RtmpWwG5ib/R.INSTALL551c1b0a646/GenomicDataCommons/man/query.Rd:46: missing link 'facets'
Rd warning: C:/Users/biocbuild/bbs-3.13-bioc/tmpdir/RtmpWwG5ib/R.INSTALL551c1b0a646/GenomicDataCommons/man/query.Rd:53: missing link 'available_expands'
    readDNAcopy                             html  
    readHTSeqFile                           html  
    response                                html  
    results                                 html  
    results_all                             html  
    select                                  html  
    slicing                                 html  
    status                                  html  
    transfer                                html  
    write_manifest                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GenomicDataCommons' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomicDataCommons' as GenomicDataCommons_1.16.0.zip
* DONE (GenomicDataCommons)