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This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).

INSTALL results for GPA on tokay2

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raw results

Package 797/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GPA 1.4.0  (landing page)
Dongjun Chung
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/GPA
git_branch: RELEASE_3_13
git_last_commit: df84978
git_last_commit_date: 2021-05-19 12:51:01 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: GPA
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GPA_1.4.0.tar.gz && rm -rf GPA.buildbin-libdir && mkdir GPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GPA.buildbin-libdir GPA_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GPA_1.4.0.zip && rm GPA_1.4.0.tar.gz GPA_1.4.0.zip
StartedAt: 2021-10-14 11:20:53 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 11:21:46 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 53.1 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GPA_1.4.0.tar.gz && rm -rf GPA.buildbin-libdir && mkdir GPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GPA.buildbin-libdir GPA_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GPA_1.4.0.zip && rm GPA_1.4.0.tar.gz GPA_1.4.0.zip
###
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install for i386

* installing *source* package 'GPA' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"c:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c cppEM.cpp -o cppEM.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GPA.dll tmp.def cppEM.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/GPA.buildbin-libdir/00LOCK-GPA/00new/GPA/libs/i386
** R
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'cov' in package 'GPA'
** help
*** installing help indices
  converting help for package 'GPA'
    finding HTML links ... done
    GPA-class                               html  
    GPA-internal                            html  
    GPA-package                             html  
    GPA                                     html  
    aTest                                   html  
    assoc                                   html  
    fitAll                                  html  
    pTest                                   html  
    shinyGPA                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GPA' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c cppEM.cpp -o cppEM.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GPA.dll tmp.def cppEM.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/GPA.buildbin-libdir/GPA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GPA' as GPA_1.4.0.zip
* DONE (GPA)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GPA' successfully unpacked and MD5 sums checked