Back to Multiple platform build/check report for BioC 3.13
ABC[D]EFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).

INSTALL results for DOSE on tokay2

To the developers/maintainers of the DOSE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DOSE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 528/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DOSE 3.18.3  (landing page)
Guangchuang Yu
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/DOSE
git_branch: RELEASE_3_13
git_last_commit: f01fef4
git_last_commit_date: 2021-09-30 06:10:18 -0400 (Thu, 30 Sep 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DOSE
Version: 3.18.3
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DOSE_3.18.3.tar.gz && rm -rf DOSE.buildbin-libdir && mkdir DOSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DOSE.buildbin-libdir DOSE_3.18.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DOSE_3.18.3.zip && rm DOSE_3.18.3.tar.gz DOSE_3.18.3.zip
StartedAt: 2021-10-14 08:23:27 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 08:24:34 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 67.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DOSE_3.18.3.tar.gz && rm -rf DOSE.buildbin-libdir && mkdir DOSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DOSE.buildbin-libdir DOSE_3.18.3.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DOSE_3.18.3.zip && rm DOSE_3.18.3.tar.gz DOSE_3.18.3.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1 6156k    1 99687    0     0   499k      0  0:00:12 --:--:--  0:00:12  499k
 34 6156k   34 2128k    0     0  1753k      0  0:00:03  0:00:01  0:00:02 1753k
 78 6156k   78 4839k    0     0  2226k      0  0:00:02  0:00:02 --:--:-- 2226k
100 6156k  100 6156k    0     0  2386k      0  0:00:02  0:00:02 --:--:-- 2386k

install for i386

* installing *source* package 'DOSE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DOSE'
    finding HTML links ... done
    DOSE-package                            html  
    DataSet                                 html  
    EXTID2NAME                              html  
    GSEA_internal                           html  
    clusterSim                              html  
    compareClusterResult-class              html  
    computeIC                               html  
    doSim                                   html  
    enrichDGN                               html  
    enrichDGNv                              html  
    enrichDO                                html  
    enrichNCG                               html  
    enrichResult-class                      html  
    enricher_internal                       html  
    gene2DO                                 html  
    geneID                                  html  
    geneInCategory                          html  
    geneSim                                 html  
    gseDGN                                  html  
    gseDO                                   html  
    gseNCG                                  html  
    gseaResult-class                        html  
    gsfilter                                html  
    mclusterSim                             html  
    parse_ratio                             html  
    rebuildAnnoData                         html  
    reexports                               html  
    setReadable                             html  
    show-methods                            html  
    simplot                                 html  
    summary-methods                         html  
    theme_dose                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DOSE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DOSE' as DOSE_3.18.3.zip
* DONE (DOSE)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'DOSE' successfully unpacked and MD5 sums checked