Shaohang Xu
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/sapFinder |
| Branch: RELEASE_3_12 |
| Last Commit: e960481 |
| Last Changed Date: 2020-10-27 10:55:33 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:28:59 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the sapFinder package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1618/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Shaohang Xu
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | ERROR | ERROR | skipped | skipped | |||||||||
| Package: sapFinder |
| Version: 1.28.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL sapFinder |
| StartedAt: 2021-05-05 16:20:39 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:20:54 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 14.9 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL sapFinder ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘sapFinder’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -c dataHandle.cpp -o dataHandle.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o sapFinder.so dataHandle.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-sapFinder/00new/sapFinder/libs ** R ** inst ** byte-compile and prepare package for lazy loading Warning message: Package 'rTANDEM' is deprecated and will be removed from Bioconductor version 3.13 ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'rTANDEM' is deprecated and will be removed from Bioconductor version 3.13 Warning: Package 'sapFinder' is deprecated and will be removed from Bioconductor version 3.13 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning: Package 'rTANDEM' is deprecated and will be removed from Bioconductor version 3.13 Warning: Package 'sapFinder' is deprecated and will be removed from Bioconductor version 3.13 ** testing if installed package keeps a record of temporary installation path * DONE (sapFinder)