Kuan-Hao Chao
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/sangeranalyseR |
| Branch: RELEASE_3_12 |
| Last Commit: d1a14ae |
| Last Changed Date: 2020-10-27 11:57:35 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:25 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the sangeranalyseR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1616/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| sangeranalyseR 1.0.0 (landing page) Kuan-Hao Chao
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: sangeranalyseR |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/sangeranalyseR_1.0.0.tar.gz && rm -rf sangeranalyseR.buildbin-libdir && mkdir sangeranalyseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangeranalyseR.buildbin-libdir sangeranalyseR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL sangeranalyseR_1.0.0.zip && rm sangeranalyseR_1.0.0.tar.gz sangeranalyseR_1.0.0.zip |
| StartedAt: 2021-05-05 18:37:57 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:40:12 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 134.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/sangeranalyseR_1.0.0.tar.gz && rm -rf sangeranalyseR.buildbin-libdir && mkdir sangeranalyseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangeranalyseR.buildbin-libdir sangeranalyseR_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL sangeranalyseR_1.0.0.zip && rm sangeranalyseR_1.0.0.tar.gz sangeranalyseR_1.0.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
1 35.5M 1 470k 0 0 2306k 0 0:00:15 --:--:-- 0:00:15 2316k
100 35.5M 100 35.5M 0 0 55.4M 0 --:--:-- --:--:-- --:--:-- 55.5M
install for i386
* installing *source* package 'sangeranalyseR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: wrong number of arguments to '=='
** help
*** installing help indices
converting help for package 'sangeranalyseR'
finding HTML links ... done
ChromatogramParam-class html
MakeBaseCalls-methods html
QualityReport-class-qualityBasePlot html
QualityReport-class-updateQualityParam
html
QualityReport-class html
SangerAlignment-class-generateReportSA
html
SangerAlignment-class-launchAppSA html
SangerAlignment-class-updateQualityParam
html
SangerAlignment-class-writeFastaSA html
SangerAlignment-class html
SangerAlignment html
SangerContig-class-generateReportSC html
SangerContig-class-launchAppSC html
SangerContig-class-updateQualityParam html
SangerContig-class-writeFastaSC html
SangerContig-class html
SangerContig html
SangerRead-class-MakeBaseCalls html
SangerRead-class-generateReportSR html
SangerRead-class-qualityBasePlot html
SangerRead-class-readTable html
SangerRead-class-updateQualityParam html
SangerRead-class-writeFastaSR html
SangerRead-class html
SangerRead html
generateReport html
generateReportSA-methods html
generateReportSC-methods html
generateReportSR-methods html
launchApp html
launchAppSA-methods html
launchAppSC-methods html
qualityBasePlot-methods html
qualityReportData html
readTable-methods html
sangerAlignmentData html
sangerContigData html
sangerReadFData html
sangeranalyseR html
updateQualityParam-methods html
writeFasta html
writeFastaSA-methods html
writeFastaSC-methods html
writeFastaSR-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'sangeranalyseR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sangeranalyseR' as sangeranalyseR_1.0.0.zip
* DONE (sangeranalyseR)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'sangeranalyseR' successfully unpacked and MD5 sums checked