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BUILD report for ngsReports on malbec1

This page was generated on 2021-05-06 12:28:24 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the ngsReports package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1226/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ngsReports 1.6.1  (landing page)
Steve Pederson
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/ngsReports
Branch: RELEASE_3_12
Last Commit: ef08d92
Last Changed Date: 2020-12-30 02:37:20 -0400 (Wed, 30 Dec 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: ngsReports
Version: 1.6.1
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ngsReports
StartedAt: 2021-05-05 20:35:31 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 20:37:07 -0400 (Wed, 05 May 2021)
EllapsedTime: 96.1 seconds
RetCode: 0
Status:   OK  
PackageFile: ngsReports_1.6.1.tar.gz
PackageFileSize: 2.63 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ngsReports
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* checking for file ‘ngsReports/DESCRIPTION’ ... OK
* preparing ‘ngsReports’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .......
Creating pdf output from LaTeX ...

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[]\T1/ptm/m/n/10 The un-der-ly-ing data from the Per_sequence_quality_scores mo
d-

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[]\T1/ptm/m/n/10 The un-der-ly-ing data from the Se-quence_Duplication_Levels m
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[]\T1/ptm/m/n/10 Estimate taken from the plot data for Se-quence_Duplication_Le
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\T1/zi4/m/n/10 Summary\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Basic_Statistics\T1/ptm/m
/n/10 , \T1/zi4/m/n/10 Per_base_sequence_quality\T1/ptm/m/n/10 , \T1/zi4/m/n/10
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\T1/zi4/m/n/10 Per_sequence_quality_scores\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Per_b
ase_sequence_content\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Per_sequence_GC_content\T1/
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\T1/zi4/m/n/10 Overrepresented_sequences\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Adapter
_Content\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Kmer_Content\T1/ptm/m/n/10 , \T1/zi4/m/
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[]\T1/ptm/m/n/10 When act-ing on a \T1/zi4/m/n/10 FastqcDataList\T1/ptm/m/n/10 
, this de-faults to a heatmap us-ing the mean Per_base_sequence_quality
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[]\T1/zi4/m/n/10 character \T1/ptm/m/n/10 vec-tor con-tain-ing the de-sired Fas
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[]\T1/ptm/m/n/10 The un-der-ly-ing data from the Per_sequence_quality_scores mo
d-

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[]\T1/ptm/m/n/10 Estimate taken from the plot data for Se-quence_Duplication_Le
vels.
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\T1/zi4/m/n/10 Summary\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Basic_Statistics\T1/ptm/m
/n/10 , \T1/zi4/m/n/10 Per_base_sequence_quality\T1/ptm/m/n/10 , \T1/zi4/m/n/10
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\T1/zi4/m/n/10 Per_sequence_quality_scores\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Per_b
ase_sequence_content\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Per_sequence_GC_content\T1/
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\T1/zi4/m/n/10 Per_base_N_content\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Sequence_Lengt
h_Distribution\T1/ptm/m/n/10 , \T1/zi4/m/n/10 Sequence_Duplication_Levels\T1/pt
m/m/n/10 ,

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[]\T1/ptm/m/n/10 The un-der-ly-ing data from the Per_sequence_quality_scores mo
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[]\T1/ptm/m/n/10 Estimate taken from the plot data for Se-quence_Duplication_Le
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[]\T1/ptm/m/n/10 The un-der-ly-ing data from the Per_sequence_quality_scores mo
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[]\T1/ptm/m/n/10 Estimate taken from the plot data for Se-quence_Duplication_Le
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