Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:33:50 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the STRINGdb package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1805/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
STRINGdb 2.2.2 (landing page) Damian Szklarczyk
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: STRINGdb |
Version: 2.2.2 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/STRINGdb_2.2.2.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.2.2.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.2.2.zip && rm STRINGdb_2.2.2.tar.gz STRINGdb_2.2.2.zip |
StartedAt: 2021-05-05 17:11:53 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 17:12:34 -0400 (Wed, 05 May 2021) |
EllapsedTime: 41.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/STRINGdb_2.2.2.tar.gz && rm -rf STRINGdb.buildbin-libdir && mkdir STRINGdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STRINGdb.buildbin-libdir STRINGdb_2.2.2.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL STRINGdb_2.2.2.zip && rm STRINGdb_2.2.2.tar.gz STRINGdb_2.2.2.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 940k 100 940k 0 0 3963k 0 --:--:-- --:--:-- --:--:-- 3985k install for i386 * installing *source* package 'STRINGdb' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'STRINGdb' finding HTML links ... done STRINGdb-class html add_diff_exp_color html add_proteins_description html coeffOfvar html delColDf html diff_exp_example1 html downloadAbsentFile html downloadAbsentFileSTRING html get_aliases html get_annotations html get_annotations_desc html get_bioc_graph html get_clusters html get_enrichment html get_graph html get_homologs_besthits html get_interactions html get_link html get_neighbors html get_paralogs html get_png html get_ppi_enrichment html get_proteins html get_subnetwork html get_summary html get_term_proteins html interactions html load html load_all html map html mp html multi_map_df html plot_network html post_payload html remove_homologous_interactions html renameColDf html set_background html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'STRINGdb' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'STRINGdb' as STRINGdb_2.2.2.zip * DONE (STRINGdb) * installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library' package 'STRINGdb' successfully unpacked and MD5 sums checked