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INSTALL report for DRIMSeq on tokay1

This page was generated on 2021-05-06 12:30:59 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the DRIMSeq package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 509/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DRIMSeq 1.18.0  (landing page)
Malgorzata Nowicka
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/DRIMSeq
Branch: RELEASE_3_12
Last Commit: 3b9c0e8
Last Changed Date: 2020-10-27 11:12:40 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: DRIMSeq
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DRIMSeq_1.18.0.tar.gz && rm -rf DRIMSeq.buildbin-libdir && mkdir DRIMSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DRIMSeq.buildbin-libdir DRIMSeq_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DRIMSeq_1.18.0.zip && rm DRIMSeq_1.18.0.tar.gz DRIMSeq_1.18.0.zip
StartedAt: 2021-05-05 17:27:07 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:27:50 -0400 (Wed, 05 May 2021)
EllapsedTime: 42.7 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/DRIMSeq_1.18.0.tar.gz && rm -rf DRIMSeq.buildbin-libdir && mkdir DRIMSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DRIMSeq.buildbin-libdir DRIMSeq_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL DRIMSeq_1.18.0.zip && rm DRIMSeq_1.18.0.tar.gz DRIMSeq_1.18.0.zip
###
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install for i386

* installing *source* package 'DRIMSeq' ...
** using staged installation
** R
** inst
** preparing package for lazy loading
Creating a new generic function for 'proportions' in package 'DRIMSeq'
** help
*** installing help indices
  converting help for package 'DRIMSeq'
    finding HTML links ... done
    MatrixList-class                        html  
    dmDSdata-class                          html  
    dmDSdata                                html  
    dmDSfit-class                           html  
    dmDSprecision-class                     html  
    dmDStest-class                          html  
    dmFilter                                html  
    dmFit                                   html  
    finding level-2 HTML links ... done

    dmPrecision                             html  
    dmSQTLdata-class                        html  
    dmSQTLdata                              html  
    dmSQTLfit-class                         html  
    dmSQTLprecision-class                   html  
    dmSQTLtest-class                        html  
    dmTest                                  html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpygCeOL/R.INSTALL193c1dd45473/DRIMSeq/man/dmTest.Rd:93: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpygCeOL/R.INSTALL193c1dd45473/DRIMSeq/man/dmTest.Rd:193: file link 'glmLRT' in package 'edgeR' does not exist and so has been treated as a topic
    dm_plotDataDSInfo                       html  
    dm_plotProportions                      html  
    plotData                                html  
    plotPValues                             html  
    plotPrecision                           html  
    plotProportions                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DRIMSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DRIMSeq' as DRIMSeq_1.18.0.zip
* DONE (DRIMSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'DRIMSeq' successfully unpacked and MD5 sums checked