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BUILD report for COMPASS on malbec1

This page was generated on 2021-05-06 12:27:13 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the COMPASS package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 358/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
COMPASS 1.28.0  (landing page)
Greg Finak
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/COMPASS
Branch: RELEASE_3_12
Last Commit: f1557e7
Last Changed Date: 2020-10-27 10:54:46 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: COMPASS
Version: 1.28.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data COMPASS
StartedAt: 2021-05-05 18:23:30 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:28:20 -0400 (Wed, 05 May 2021)
EllapsedTime: 290.1 seconds
RetCode: 0
Status:   OK  
PackageFile: COMPASS_1.28.0.tar.gz
PackageFileSize: 1.243 MiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data COMPASS
###
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* checking for file ‘COMPASS/DESCRIPTION’ ... OK
* preparing ‘COMPASS’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
Warning in system2(command, args, stdout = NULL, stderr = NULL, ...) :
  error in running command
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* running ‘cleanup’
Warning in system2(command, args, stdout = NULL, stderr = NULL, ...) :
  error in running command
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘COMPASS/examples’ is empty
WARNING: directory ‘COMPASS/incubator’ is empty
WARNING: directory ‘COMPASS/internal’ is empty
WARNING: directory ‘COMPASS/refactor’ is empty
WARNING: directory ‘COMPASS/scratch’ is empty
* building ‘COMPASS_1.28.0.tar.gz’