Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for restfulSE on tokay2

This page was generated on 2020-10-17 11:57:36 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE restfulSE PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1468/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
restfulSE 1.10.0
Shweta Gopaulakrishnan
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/restfulSE
Branch: RELEASE_3_11
Last Commit: 5139cea
Last Changed Date: 2020-04-27 15:10:42 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: restfulSE
Version: 1.10.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/restfulSE_1.10.0.tar.gz && rm -rf restfulSE.buildbin-libdir && mkdir restfulSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=restfulSE.buildbin-libdir restfulSE_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL restfulSE_1.10.0.zip && rm restfulSE_1.10.0.tar.gz restfulSE_1.10.0.zip
StartedAt: 2020-10-16 18:08:42 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:09:47 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 64.8 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/restfulSE_1.10.0.tar.gz && rm -rf restfulSE.buildbin-libdir && mkdir restfulSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=restfulSE.buildbin-libdir restfulSE_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL restfulSE_1.10.0.zip && rm restfulSE_1.10.0.tar.gz restfulSE_1.10.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  253k  100  253k    0     0  4080k      0 --:--:-- --:--:-- --:--:-- 4526k

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'restfulSE' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'restfulSE'
    finding HTML links ... done
    BQ3_Array-class                         html  
    BQ3_Array                               html  
    BQ3_ArraySeed-class                     html  
    BQ3_Matrix-class                        html  
    BQ3_Source-class                        html  
    BQ3_Source                              html  
    BQM_Array-class                         html  
    BQM_Array                               html  
    BQM_ArraySeed-class                     html  
    BQM_Matrix-class                        html  
    BQM_Source-class                        html  
    BQM_Source                              html  
    BQSummarizedExperiment                  html  
    RESTfulSummarizedExperiment-class       html  
    RESTfulSummarizedExperiment             html  
    assay-BQSummarizedExperiment-missing-method
                                            html  
    assayNames-BQSummarizedExperiment-method
                                            html  
    assays-RESTfulSummarizedExperiment-method
                                            html  
    basic_clinvars                          html  
    bqConn                                  html  
    cgcConn                                 html  
    dim-BQ3_ArraySeed-method                html  
    dim-BQM_ArraySeed-method                html  
    dim-RESTfulSummarizedExperiment-method
                                            html  
    dimnames-BQ3_ArraySeed-method           html  
    dimnames-BQM_ArraySeed-method           html  
    goPatt                                  html  
    gtexTiss                                html  
    isbCgcDatasets                          html  
    isbCgcTables                            html  
    newDA                                   html  
    pancan_SE                               html  
    se100k                                  html  
    seByTumor                               html  
    seByTumor_2016                          html  
    tasicCortex                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'restfulSE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'restfulSE' as restfulSE_1.10.0.zip
* DONE (restfulSE)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'restfulSE' successfully unpacked and MD5 sums checked